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S1-16-all-fractions_k255_2490927

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-16-all-fractions_k255_2490927_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..1706)
DNA (1704bp) protein (568aa)
capsular exopolysaccharide family protein (EC:2.7.10.2) id=12556216 bin=CNBR_ACIDO species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Protein-tyrosine kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_2490927_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1755..2576)
DNA (822bp) protein (274aa)
Exopolysaccharide biosynthesis protein n=1 Tax=planctomycete KSU-1 RepID=I3IJX5_9PLAN
polysaccharide export protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-16-all-fractions_k255_2490927_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2573..3790)
DNA (1218bp) protein (406aa)
id=12556218 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_2490927_4
unknown

Not on your lists

comp(3938..4384)
DNA (447bp) protein (149aa)
id=12556219 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S1-16-all-fractions_k255_2490927_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4669..6117)
DNA (1449bp) protein (483aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEU4_ANADE
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
S1-16-all-fractions_k255_2490927_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6155..6778)
DNA (624bp) protein (208aa)
lipoprotein id=12556220 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_2490927_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7057..7599)
DNA (543bp) protein (181aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_2490927_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7875..8225)
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_2490927_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8222..9949)
DNA (1728bp) protein (576aa)
Pseudouridine synthase n=2 Tax=Methylobacterium extorquens RepID=C5B254_METEA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_2490927_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9952..11337)
DNA (1386bp) protein (462aa)
Fis family two component sigma-54 specific transcriptional regulator id=12554723 bin=CNBR_ACIDO species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-16-all-fractions_k255_2490927_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11447..11659
DNA (213bp) protein (71aa)
id=12554722 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_2490927_12

Not on your lists

11656..11919
DNA (264bp) protein (88aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AHN97849.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
id=12554721 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S1-16-all-fractions_k255_2490927_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12259..13272
DNA (1014bp) protein (338aa)
fliA1; RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12554720 bin=CNBR_ACIDO species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma 28 subunit FliA/WhiG
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-16-all-fractions_k255_2490927_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13098..14621)
DNA (1524bp) protein (508aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=12554719 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_2490927_15
unknown

Not on your lists

comp(14709..14801)
DNA (93bp) protein (31aa)

This feature has no annotations

S1-16-all-fractions_k255_2490927_16
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14812..17175)
DNA (2364bp) protein (788aa)
Copper-translocating P-type ATPase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E8B6_GEOSM
ATPase P
Tax=GWC2_Geobacteraceae_58_44_curated
S1-16-all-fractions_k255_2490927_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

17339..18574
DNA (1236bp) protein (412aa)
L-sorbosone dehydrogenase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHD4_GLOVI
L-sorbosone dehydrogenase
L-sorbosone dehydrogenase {ECO:0000313|EMBL:BAC90544.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
S1-16-all-fractions_k255_2490927_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18558..20225)
DNA (1668bp) protein (556aa)
hypothetical protein id=12556165 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-16-all-fractions_k255_2490927_19
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20435..21940)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034B3C0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK73009.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
S1-16-all-fractions_k255_2490927_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21979..22269)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034807D7
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAK03447.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
Displaying 20 items

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