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S1-18-all-fractions_k255_5101739

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_5101739_1
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(1..909)
DNA (909bp) protein (303aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Putative oligoendopeptidase F n=1 Tax=uncultured crenarchaeote RepID=Q702A0_9CREN
Putative oligoendopeptidase F {ECO:0000313|EMBL:CAF28724.1}; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
S1-18-all-fractions_k255_5101739_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1094..1537)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84915.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S1-18-all-fractions_k255_5101739_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1912..2718)
DNA (807bp) protein (269aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
S1-18-all-fractions_k255_5101739_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2821..3018
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6S2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56956.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_5101739_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3041..3487)
DNA (447bp) protein (149aa)
50S ribosomal protein L19e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_5101739_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3493..3915)
DNA (423bp) protein (141aa)
50S ribosomal protein L32e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
rpl32e; 50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_5101739_7
unknown

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3955..4071
DNA (117bp) protein (39aa)

This feature has no annotations

S1-18-all-fractions_k255_5101739_8
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4058..4681
DNA (624bp) protein (208aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
Superoxide dismutase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAT0_9ARCH
superoxide dismutase
S1-18-all-fractions_k255_5101739_9
unknown

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comp(4727..5296)
DNA (570bp) protein (190aa)

This feature has no annotations

S1-18-all-fractions_k255_5101739_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5381..5689)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILQ7_NITGG
rps10p; 30S ribosomal protein S10p
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S1-18-all-fractions_k255_5101739_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5704..7029)
DNA (1326bp) protein (442aa)
Elongation factor 1-alpha n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICE8_NITGG
tuf; elongation factor 1-alpha
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_5101739_12

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7159..7443
DNA (285bp) protein (95aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=1456322 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_86_F11.;"
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL3_NITGG
pterin-4-alpha-carbinolamine dehydratase
S1-18-all-fractions_k255_5101739_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7495..8586)
DNA (1092bp) protein (364aa)
glnA2; glutamate--ammonia ligase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamine synthetase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ1_NITGG
Displaying 13 items

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