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S1-18-all-fractions_k255_6920419

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_6920419_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..371)
DNA (369bp) protein (123aa)
mtnA; translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; MTNA-like protein {ECO:0000256|HAMAP-Rule:MF_01678}; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHQ3_NITGG
S1-18-all-fractions_k255_6920419_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(444..1850)
DNA (1407bp) protein (469aa)
UDP-glucose/GDP-mannose family dehydrogenase (EC:1.1.1.-)
UDP-glucose/GDP-mannose family dehydrogenase {ECO:0000313|EMBL:AFU59464.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU59464.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
UDP-glucose/GDP-mannose family dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ1_NITGG
S1-18-all-fractions_k255_6920419_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1955..3007
DNA (1053bp) protein (351aa)
ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligase) (EC:6.3.4.-)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ3_NITGG
S1-18-all-fractions_k255_6920419_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3019..3516)
DNA (498bp) protein (166aa)
HEAT repeats (EC:1.14.99.29)
HEAT repeats {ECO:0000313|EMBL:AIF82906.1}; EC=1.14.99.29 {ECO:0000313|EMBL:AIF82906.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative HEAT repeat-containing PBS lyase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKC1_NITGG
S1-18-all-fractions_k255_6920419_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3600..4061
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INN2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82905.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S1-18-all-fractions_k255_6920419_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4107..4517)
DNA (411bp) protein (137aa)
Putative signal transduction response regulator, receiver domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9I2_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58006.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_6920419_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4655..5137
DNA (483bp) protein (161aa)
Pentapeptide repeat protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMX6_NITGG
pentapeptide repeat-containing protein
Pentapeptide repeat protein {ECO:0000313|EMBL:AFU58389.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_6920419_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5394..5981
DNA (588bp) protein (196aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Adenine phosphoribosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG22_NITGG
S1-18-all-fractions_k255_6920419_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5974..6783
DNA (810bp) protein (270aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Purine nucleoside phosphorylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK0_NITGG
S1-18-all-fractions_k255_6920419_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6890..7189)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILE4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60358.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_6920419_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7193..7621)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP20_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60359.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S1-18-all-fractions_k255_6920419_12
unknown

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comp(7646..7753)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 12 items

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