ggKbase home page

S1-18-all-fractions_k255_13852

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_13852_1
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..902
DNA (900bp) protein (300aa)
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQC2_SORCE
1,4-alpha-glucan branching protein {ECO:0000313|EMBL:KJR67047.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
1,4-alpha-glucan branching protein
S1-18-all-fractions_k255_13852_2
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

986..3001
DNA (2016bp) protein (672aa)
Glycogen debranching protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCF2_SORCE
glycogen debranching protein
Tax=GWC2_Nitrospirae_57_9_curated
S1-18-all-fractions_k255_13852_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3042..4604
DNA (1563bp) protein (521aa)
Peptidase S10, serine carboxypeptidase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3D4_GEOUR id=5223217 bin=16ft_combo_ws3_JS1 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase S10, serine carboxypeptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
S1-18-all-fractions_k255_13852_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4869..5309
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_13852_5
unknown

Not on your lists

comp(5374..5586)
DNA (213bp) protein (71aa)

This feature has no annotations

S1-18-all-fractions_k255_13852_6
unknown

Not on your lists

comp(5591..5767)
DNA (177bp) protein (59aa)

This feature has no annotations

S1-18-all-fractions_k255_13852_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5955..6314)
DNA (360bp) protein (120aa)
ribosome-associated heat shock protein implicated in recycling of 50S subunit id=12555177 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA-binding S4 domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_13852_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6413..7489)
DNA (1077bp) protein (359aa)
Peptidylprolyl cis-trans isomerase, PpiC-type n=2 Tax=Geobacter metallireducens RepID=Q39XG7_GEOMG
PpiC-type peptidylprolyl cis-trans isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-18-all-fractions_k255_13852_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7586..8170)
DNA (585bp) protein (195aa)
RNA-binding protein RNP-3 id=12556015 bin=CNBR_ACIDO species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_13852_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

8252..9472
DNA (1221bp) protein (407aa)
Sulphate transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV72_KORVE
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AIE85006.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Displaying 10 items

View Taxonomy