ggKbase home page

S1-18-all-fractions_k255_1308592

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_1308592_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3..926
DNA (924bp) protein (308aa)
acyl-CoA desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VS86_9LEPT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_1308592_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1084..2256)
DNA (1173bp) protein (391aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR80_KORVE
MacB-like periplasmic core domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-18-all-fractions_k255_1308592_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2258..3442)
DNA (1185bp) protein (395aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q3G2_DESAF
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
S1-18-all-fractions_k255_1308592_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3447..4151)
DNA (705bp) protein (235aa)
ABC transporter related id=1251224 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ABC transporter ATP-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
S1-18-all-fractions_k255_1308592_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4151..5446)
DNA (1296bp) protein (432aa)
RND transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B6C2B5
RND family efflux transporter MFP subunit
Tax=RBG_16_Acidobacteria_70_10_curated
S1-18-all-fractions_k255_1308592_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5556..6353)
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQ99_MODMB
short-chain dehydrogenase
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:CCH85562.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
S1-18-all-fractions_k255_1308592_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6420..7148)
DNA (729bp) protein (243aa)
hypothetical protein; K06896 id=12555449 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_1308592_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7220..7522
DNA (303bp) protein (101aa)
hypothetical protein id=12555448 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_1308592_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7532..8224)
DNA (693bp) protein (231aa)
hypothetical protein id=12555447 bin=CNBR_ACIDO species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S1-18-all-fractions_k255_1308592_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8224..9036)
DNA (813bp) protein (271aa)
electron transport protein SCO1/SenC; K07152 id=12555446 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron transport protein SCO1/SenC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1308592_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9323..9679
DNA (357bp) protein (119aa)
RNP-1 like RNA-binding protein id=12554823 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1308592_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9827..10549
DNA (723bp) protein (241aa)
hypothetical protein id=12555433 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_1308592_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(10773..11789)
DNA (1017bp) protein (339aa)
Alpha/beta hydrolase; K07019 id=12555432 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative alpha/beta-hydrolase fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1308592_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11862..12068)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030D3D3A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1308592_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12156..13025)
DNA (870bp) protein (290aa)
hypothetical protein id=12555044 bin=CNBR_ACIDO species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
membrane protease subunit, stomatin/prohibitin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1308592_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13180..14709)
DNA (1530bp) protein (510aa)
hypothetical protein id=12555431 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1308592_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14706..17258)
DNA (2553bp) protein (851aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1308592_18
unknown

Not on your lists

17270..17413
DNA (144bp) protein (48aa)

This feature has no annotations

S1-18-all-fractions_k255_1308592_19
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

17450..19651
DNA (2202bp) protein (734aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD92_CHLTF
dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase {ECO:0000313|EMBL:AEP11952.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S1-18-all-fractions_k255_1308592_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19605..20171)
DNA (567bp) protein (189aa)
LemA family protein; K03744 LemA protein id=12555429 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LemA family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1308592_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20180..21049)
DNA (870bp) protein (290aa)
hypothetical protein; K06872 uncharacterized protein id=12555428 bin=CNBR_ACIDO species=Spirochaeta bajacaliforniensis genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_1308592_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21046..21747)
DNA (702bp) protein (234aa)
cytoplasmic protein id=12555427 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_1308592_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22150..23112
DNA (963bp) protein (321aa)
hypothetical protein id=12555426 bin=CNBR_ACIDO species=Agarivorans albus genus=Agarivorans taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_1308592_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(23216..24100)
DNA (885bp) protein (295aa)
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=12555425 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP dependent DNA ligase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_1308592_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

24563..25231
DNA (669bp) protein (223aa)
ial:IALB_3049 Major facilitator superfamily permease id=717666 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Major facilitator superfamily permease
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 25 items

View Taxonomy