ggKbase home page

S1-18-all-fractions_k255_5512580

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_5512580_1
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..589
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UR29_XANC8
hypothetical protein
Strain LMCP11 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27678.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
S1-18-all-fractions_k255_5512580_2
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(645..1307)
DNA (663bp) protein (221aa)
Phosphoglycerate mutase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13DF0_RHOPS
Phosphoglycerate mutase
Tax=BJP_IG2157_Anaerolineales_55_23
S1-18-all-fractions_k255_5512580_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(1304..3601)
DNA (2298bp) protein (766aa)
Serine/threonine protein kinase id=1250165 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
serine/threonin protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
S1-18-all-fractions_k255_5512580_4
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3903..4490
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KN33_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:KJH69748.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
S1-18-all-fractions_k255_5512580_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4483..6240
DNA (1758bp) protein (586aa)
OmpA/MotB protein n=1 Tax=Fischerella muscicola RepID=UPI0002EF8D58
Flagellar motor protein MotB {ECO:0000313|EMBL:KIF17492.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
OmpA/MotB domain-containing protein
S1-18-all-fractions_k255_5512580_6
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6248..6745
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI000374C26F
Ras-related GTP-binding protein {ECO:0000313|EMBL:KJH69722.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
small GTP-binding protein
S1-18-all-fractions_k255_5512580_7
unknown

Not on your lists

6768..7364
DNA (597bp) protein (199aa)

This feature has no annotations

S1-18-all-fractions_k255_5512580_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7397..8881
DNA (1485bp) protein (495aa)
Malate dehydrogenase (EC:1.1.1.37) id=12556098 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Malate dehydrogenase (EC:1.1.1.37)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_5512580_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8888..9469
DNA (582bp) protein (194aa)
Putative flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z1G1_9RHIZ
Putative flavoprotein {ECO:0000313|EMBL:EIM30053.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
NADPH-dependent FMN reductase
S1-18-all-fractions_k255_5512580_10
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

9774..10955
DNA (1182bp) protein (394aa)
hypothetical protein id=17013290 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
major facilitator family transporter
Tax=RBG_16_Aminicenantes_66_30_curated
S1-18-all-fractions_k255_5512580_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10952..11626
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN9_RUBXD
HAD family hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:ABG05239.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S1-18-all-fractions_k255_5512580_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11703..12803)
DNA (1101bp) protein (367aa)
Rieske (2Fe-2S) protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJE0_KORVE
Rieske (2Fe-2S) protein
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:ABF43010.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
S1-18-all-fractions_k255_5512580_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

12974..13417
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000382B1B3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_5512580_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13424..14266
DNA (843bp) protein (281aa)
Cof protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJB4_KORVE
Cof protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_5512580_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14404..16134)
DNA (1731bp) protein (577aa)
Glr0375 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NNN6_GLOVI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_5512580_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16296..17726
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035E42ED
amino acid transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_5512580_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17790..18719
DNA (930bp) protein (310aa)
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NVX3_9DELT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_5512580_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18707..20026)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003700BD7
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S1-18-all-fractions_k255_5512580_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20225..21055
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLI4_MOOTA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_5512580_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21052..21348
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QS7_SYMTH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_5512580_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21504..22001)
DNA (498bp) protein (166aa)
hypothetical protein id=12557236 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 21 items

View Taxonomy