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S1-18-all-fractions_k255_6422962

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1-18-all-fractions_k255_6422962_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3..317
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C00EA
PadR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6422962_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

320..2941
DNA (2622bp) protein (874aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6422962_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2964..4220)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=12555319 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4201..5184)
DNA (984bp) protein (328aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=12555320 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6422962_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5177..6121)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U6P6_BORBO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_6422962_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6118..6807)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D3F38
allophanate hydrolase 2 subunit 1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6847..8274)
DNA (1428bp) protein (476aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-); K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] id=12555321 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC:6.3.2.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6422962_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8285..9247)
DNA (963bp) protein (321aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] id=12555322 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase U61 LD-carboxypeptidase A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_6422962_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9247..10341)
DNA (1095bp) protein (365aa)
glycosyl hydrolase, family 3; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] id=12555323 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycoside hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_6422962_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10461..12245
DNA (1785bp) protein (595aa)
PHP C-terminal domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AR9_SOLUE
phosphotransferase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12242..12484
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12506..12910)
DNA (405bp) protein (135aa)
hypothetical protein id=12555325 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ymfM; hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_6422962_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12892..13638)
DNA (747bp) protein (249aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=12555326 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S1-18-all-fractions_k255_6422962_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13635..13964)
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6422962_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13921..15921)
DNA (2001bp) protein (667aa)
TPR repeat id=4069950 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S1-18-all-fractions_k255_6422962_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15925..16584)
DNA (660bp) protein (220aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=12555328 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rnhB; ribonuclease hII (rnase hII) protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S1-18-all-fractions_k255_6422962_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(16671..17024)
DNA (354bp) protein (118aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=12555329 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L19
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6422962_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17011..17778)
DNA (768bp) protein (256aa)
tRNA (guanine-N1)-methyltransferase id=12555330 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA (guanine-N(1)-)-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6422962_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17872..18396)
DNA (525bp) protein (175aa)
16S rRNA-processing protein RimM id=12555331 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18397..18651)
DNA (255bp) protein (85aa)
UPF0109 protein Theam_1299 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3D0_THEA1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S1-18-all-fractions_k255_6422962_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(18654..19046)
DNA (393bp) protein (131aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=12555333 bin=CNBR_ACIDO species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S16
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S1-18-all-fractions_k255_6422962_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(19126..20481)
DNA (1356bp) protein (452aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12555334 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S1-18-all-fractions_k255_6422962_23
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(20796..21137)
DNA (342bp) protein (114aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 23 items

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