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S2-16-all-fractions_k255_1833714

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_1833714_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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3..899
DNA (897bp) protein (299aa)
squalene-associated FAD-dependent desaturase (EC:1.14.99.30) id=12557177 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
squalene-associated FAD-dependent desaturase (EC:1.14.99.30)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_1833714_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1030..2211)
DNA (1182bp) protein (394aa)
Putative dimethylaniline monooxygenase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7D6_HALH1
dimethylaniline monooxygenase
Putative dimethylaniline monooxygenase {ECO:0000313|EMBL:AEE53163.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
S2-16-all-fractions_k255_1833714_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2227..3177)
DNA (951bp) protein (317aa)
4-hydroxybutyrate dehydrogenase n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VDK5_PSEST
4-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EMD98077.1}; TaxID=1212548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri NF13.;"
Nucleoside-diphosphate-sugar epimerase
S2-16-all-fractions_k255_1833714_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3269..3997
DNA (729bp) protein (243aa)
3-oxoacyl-ACP reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3926
short-chain alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S2-16-all-fractions_k255_1833714_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4140..4658)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036E39EF
Acetyltransferase {ECO:0000313|EMBL:EIT69802.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
putative GCN5-related N-acetyltransferase
S2-16-all-fractions_k255_1833714_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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5163..6512
DNA (1350bp) protein (450aa)
Fis family two component sigma-54 specific transcriptional regulator id=12556394 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_1833714_7

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comp(6544..7449)
DNA (906bp) protein (302aa)
L1_beta_lactamase {ECO:0000313|EMBL:AIA11259.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Zn-dependent hydrolase, glyoxylase id=12554801 bin=CNBR_ACIDO species=Arenimonas oryziterrae genus=Arenimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase
S2-16-all-fractions_k255_1833714_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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7504..8694
DNA (1191bp) protein (397aa)
thiI; thiamine biosynthesis protein thiI id=12557176 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiI; thiamine biosynthesis protein thiI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_1833714_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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8743..10188
DNA (1446bp) protein (482aa)
Putative fructose-bisphosphate aldolase id=8266785 bin=CD_OP8_4m species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
aldolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1833714_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10276..10785)
DNA (510bp) protein (170aa)
NUDIX hydrolase (Modular protein) id=1969969 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1833714_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11078..11638
DNA (561bp) protein (187aa)
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88) id=12557175 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
def; peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) (EC:3.5.1.88)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_1833714_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11649..13202
DNA (1554bp) protein (518aa)
putative alternative thymidylate synthase id=5802646 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
putative alternative thymidylate synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_1833714_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13215..14399
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWA1_9BACT
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_1833714_14
unknown

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comp(14481..14606)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 14 items

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