ggKbase home page

S2-16-all-fractions_k255_2581874

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_2581874_1
unknown

Not on your lists

2..241
DNA (240bp) protein (80aa)

This feature has no annotations

S2-16-all-fractions_k255_2581874_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

249..2519
DNA (2271bp) protein (757aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] id=12554192 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease R
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2581874_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2529..4439
DNA (1911bp) protein (637aa)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S0_SOLUE
selenocysteine-specific translation elongation factor SelB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2581874_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4463..4621)
DNA (159bp) protein (53aa)
preprotein translocase subunit TatA n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5308D
twin arginine-targeting protein translocase, TatA/E family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2581874_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4722..5588
DNA (867bp) protein (289aa)
von Willebrand factor, type A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CM7_SOLUE
von Willebrand factor A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2581874_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5748..6671
DNA (924bp) protein (308aa)
TonB-like protein id=12554190 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_2581874_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6712..7353)
DNA (642bp) protein (214aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_2581874_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7350..8387)
DNA (1038bp) protein (346aa)
penicillin-binding protein, beta-lactamase class C id=24407532 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S2-16-all-fractions_k255_2581874_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8549..10177)
DNA (1629bp) protein (543aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL id=12554189 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S2-16-all-fractions_k255_2581874_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10302..10598)
DNA (297bp) protein (99aa)
chaperonin Cpn10; K04078 chaperonin GroES id=12554188 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Co-chaperonin GroES (HSP10)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_2581874_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10762..10992)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000367E6AB
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_2581874_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10989..11897)
DNA (909bp) protein (303aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=12554186 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_2581874_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12010..13038
DNA (1029bp) protein (343aa)
hypothetical protein; K07027 id=12554184 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_2581874_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13035..13424
DNA (390bp) protein (130aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=12554183 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nrdR; transcriptional regulator NrdR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 14 items

View Taxonomy