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S2-16-all-fractions_k255_6026529

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2-16-all-fractions_k255_6026529_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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1..462
DNA (462bp) protein (154aa)
o-antigen export system permease; K09690 lipopolysaccharide transport system permease protein id=12554731 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polysaccharide/polyol phosphate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S2-16-all-fractions_k255_6026529_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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506..1849
DNA (1344bp) protein (448aa)
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein id=12554730 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_6026529_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1882..2382
DNA (501bp) protein (167aa)
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-) id=12554729 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S2-16-all-fractions_k255_6026529_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2465..6121
DNA (3657bp) protein (1219aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12554728 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcription-repair coupling factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_6026529_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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6161..7267
DNA (1107bp) protein (369aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=12554727 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_6026529_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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7280..7804
DNA (525bp) protein (175aa)
Putative Transcription termination/antitermination factor NusG id=4775526 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcription termination factor NusG domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S2-16-all-fractions_k255_6026529_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7829..8887
DNA (1059bp) protein (353aa)
tRNA-dihydrouridine synthase id=12554726 bin=CNBR_ACIDO species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative TIM-barrel protein, nifR3 family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S2-16-all-fractions_k255_6026529_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8893..10011)
DNA (1119bp) protein (373aa)
UPI0003AAA0B0 related cluster n=1 Tax=unknown RepID=UPI0003AAA0B0
glycosyl transferase family 2 protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 8 items

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