ggKbase home page

S3-16-all-fractions_k255_181214

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_181214_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..895
DNA (894bp) protein (298aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32)
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:CCH88449.1}; EC=3.5.1.32 {ECO:0000313|EMBL:CCH88449.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Peptidase M20D, amidohydrolase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EYI6_MODMB
S3-16-all-fractions_k255_181214_2
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(906..1541)
DNA (636bp) protein (212aa)
UPF0126 membrane protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RPD3_BLASD
Membrane protein {ECO:0000313|EMBL:KGH46343.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
S3-16-all-fractions_k255_181214_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1697..1936
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7M8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75487.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2012..2332
DNA (321bp) protein (107aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7M9_GEOOG
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ADB75488.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2412..2876
DNA (465bp) protein (155aa)
Anti-sigma factor antagonist n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7N0_GEOOG
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_6
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2881..3585)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003021351
Uncharacterized protein {ECO:0000313|EMBL:KHD99133.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
hypothetical protein
S3-16-all-fractions_k255_181214_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3654..4025)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7N6_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75495.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_8
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4187..5410
DNA (1224bp) protein (408aa)
Transcriptional regulator, CdaR n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7N5_GEOOG
transcriptional regulator CdaR
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ADB75494.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5517..6263
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKM2_NAKMY
Oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIY41141.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
S3-16-all-fractions_k255_181214_10
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6317..7573)
DNA (1257bp) protein (419aa)
Citrate lyase beta subunit n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XF53_9PSEU
Citrate lyase beta subunit {ECO:0000313|EMBL:EHR61463.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hypothetical protein
S3-16-all-fractions_k255_181214_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7731..9443)
DNA (1713bp) protein (571aa)
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:ACV80428.1}; EC=1.1.1.38 {ECO:0000313|EMBL:ACV80428.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIG3_NAKMY
S3-16-all-fractions_k255_181214_12
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9594..11081)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00036BDB99
Xanthine permease {ECO:0000313|EMBL:CCH77592.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
xanthine permease
S3-16-all-fractions_k255_181214_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11117..11995)
DNA (879bp) protein (293aa)
urate oxidase (EC:1.7.3.3)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Uricase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7K9_GEOOG
S3-16-all-fractions_k255_181214_14
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12011..12343)
DNA (333bp) protein (111aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003826904
hiuH; transthyretin family protein
S3-16-all-fractions_k255_181214_15
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12340..12864)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00037B98E5
OHCU decarboxylase
OHCU decarboxylase {ECO:0000313|EMBL:ADB72920.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_16
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12861..14090)
DNA (1230bp) protein (410aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
allantoicase (EC:3.5.3.4)
Probable allantoicase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y596_THEBD
S3-16-all-fractions_k255_181214_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14087..15439)
DNA (1353bp) protein (451aa)
Allantoinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7L1_GEOOG
allantoinase
Allantoinase {ECO:0000313|EMBL:ADB75470.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
S3-16-all-fractions_k255_181214_18
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15967..17265)
DNA (1299bp) protein (433aa)
guanine deaminase (EC:3.5.4.3)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037B3913
Guanine deaminase {ECO:0000313|EMBL:KJR06305.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
S3-16-all-fractions_k255_181214_19
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17262..18131)
DNA (870bp) protein (290aa)
Molybdenum cofactor sulfurylase n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H8N9_STRPR
Molybdenum cofactor sulfurylase {ECO:0000313|EMBL:EDY63200.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
xanthine dehydrogenase accessory protein XdhC
S3-16-all-fractions_k255_181214_20
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18142..20589)
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000382C0A6
Putative dehydrogenase {ECO:0000313|EMBL:CCH79266.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
xanthine dehydrogenase
S3-16-all-fractions_k255_181214_21
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20663..21379)
DNA (717bp) protein (239aa)
dehydrogenase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI0003739315
Uncharacterized protein {ECO:0000313|EMBL:CCH79267.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
dehydrogenase
Displaying 21 items

View Taxonomy