ggKbase home page

S3-16-all-fractions_k255_1449156

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_1449156_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..981)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SST3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX20242.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
S3-16-all-fractions_k255_1449156_2
unknown

Not on your lists

comp(1060..1299)
DNA (240bp) protein (80aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_3
unknown

Not on your lists

1700..1915
DNA (216bp) protein (72aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_4
unknown

Not on your lists

2060..2986
DNA (927bp) protein (309aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_5
unknown

Not on your lists

comp(3113..3478)
DNA (366bp) protein (122aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_6
unknown

Not on your lists

3909..4181
DNA (273bp) protein (91aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_7

Not on your lists

comp(4875..5198)
DNA (324bp) protein (108aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
Marine sediment metagenome DNA, contig: S03H2_S14627 {ECO:0000313|EMBL:GAH70395.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
WD40 domain-containing protein
S3-16-all-fractions_k255_1449156_8
unknown

Not on your lists

comp(5415..5705)
DNA (291bp) protein (97aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_9
unknown

Not on your lists

comp(6060..6218)
DNA (159bp) protein (53aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_10
unknown

Not on your lists

comp(6199..6711)
DNA (513bp) protein (171aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_11
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6905..8068
DNA (1164bp) protein (388aa)
Peptidase M6, immune inhibitor A n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QJG2_SHELP
peptidase M6, immune inhibitor A
Peptidase M6, immune inhibitor A {ECO:0000313|EMBL:ABO25610.1}; Flags: Precursor;; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella loihica (strain ATCC BAA-1088 / PV-4).;"
S3-16-all-fractions_k255_1449156_12
unknown

Not on your lists

comp(8788..9468)
DNA (681bp) protein (227aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9956..12745)
DNA (2790bp) protein (930aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] id=24492102 bin=RBG_19FT_COMBO_GAL15_69_19 species=Cytophaga aurantiaca genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DNA ligase D
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S3-16-all-fractions_k255_1449156_14
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13219..14028)
DNA (810bp) protein (270aa)
Probable DNA repair protein CathTA2_1346 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6D4_9BACI
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
Ku domain-containing protein
S3-16-all-fractions_k255_1449156_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14216..14653
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57792.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14925..15290)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59213.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15411..16019
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKY6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59212.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_18
unknown

Not on your lists

comp(16029..16166)
DNA (138bp) protein (46aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16231..16821
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INI1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82232.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S3-16-all-fractions_k255_1449156_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17256..17846
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I920_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57791.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18041..19186)
DNA (1146bp) protein (382aa)
sat; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066};; ATP-sulfurylase {ECO:0000256|HAMAP-Rule:MF_00066}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00066}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Sulfate adenylyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9E9_NITGG
S3-16-all-fractions_k255_1449156_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19234..20091)
DNA (858bp) protein (286aa)
Putative PAPS reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIP3_NITGG
PAPS reductase
Putative PAPS reductase {ECO:0000313|EMBL:AFU57972.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20177..21709
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57974.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21911..22351
DNA (441bp) protein (147aa)
Putiative histidine triad (HIT) protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDZ1_NITGG
putiative histidine triad (HIT) protein
Putiative histidine triad (HIT) protein {ECO:0000313|EMBL:AFU57975.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_25
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22286..22615)
DNA (330bp) protein (110aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15486.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S3-16-all-fractions_k255_1449156_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22635..23351)
DNA (717bp) protein (239aa)
Phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9F3_NITGG
phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family
Phosphatase of the haloacid dehalogenase (HAD)-like hydrolase family {ECO:0000313|EMBL:AFU57976.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S3-16-all-fractions_k255_1449156_27
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23569..26097)
DNA (2529bp) protein (843aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJZ6_9FIRM
phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:AGL03498.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
S3-16-all-fractions_k255_1449156_28
unknown

Not on your lists

comp(26094..26504)
DNA (411bp) protein (137aa)

This feature has no annotations

S3-16-all-fractions_k255_1449156_29
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26567..27388
DNA (822bp) protein (274aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=Q8U315_PYRFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN03454.1}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
S3-16-all-fractions_k255_1449156_30
unknown

Not on your lists

comp(27641..27784)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy