ggKbase home page

S3-16-all-fractions_k255_4335228

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4335228_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..483
DNA (483bp) protein (161aa)
TrkA domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XW52_9ACTO
TrkA domain-containing protein {ECO:0000313|EMBL:EON23541.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
TrkA domain-containing protein
S3-16-all-fractions_k255_4335228_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

499..1122
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XV10_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23138.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4335228_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1196..1861)
DNA (666bp) protein (222aa)
Sulfurtransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5XBU7_9PSEU
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
ArsR transcriptional regulator
S3-16-all-fractions_k255_4335228_4
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1854..3146)
DNA (1293bp) protein (431aa)
MFS transporter n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B4982C
MFS transporter {ECO:0000313|EMBL:EWT04314.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
major facilitator transporter
S3-16-all-fractions_k255_4335228_5
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3143..4504)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XWZ6_RHOOP
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
S3-16-all-fractions_k255_4335228_6
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4696..5364
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RSD5_MYCXE
Uncharacterized protein {ECO:0000313|EMBL:KGN33188.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
S3-16-all-fractions_k255_4335228_7
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5378..6052)
DNA (675bp) protein (225aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625D22
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJR08692.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
Putative transcriptional regulatory protein
S3-16-all-fractions_k255_4335228_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6194..7018
DNA (825bp) protein (275aa)
Methyltransferase type 11 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHS0_CHIPD
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S3-16-all-fractions_k255_4335228_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7094..8476)
DNA (1383bp) protein (461aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKM2_NOCSJ
S3-16-all-fractions_k255_4335228_10
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9023..9766
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00038126C1
Putative uncharacterized protein {ECO:0000313|EMBL:EDY58969.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
S3-16-all-fractions_k255_4335228_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10672..11490
DNA (819bp) protein (273aa)
Aminotransferase, class IV n=1 Tax=Nocardioides sp. CF8 RepID=R7XW31_9ACTO
Aminotransferase, class IV {ECO:0000313|EMBL:EON23544.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
class IV aminotransferase
S3-16-all-fractions_k255_4335228_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11555..11914
DNA (360bp) protein (120aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000255|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000255|HAMAP-Rule:MF_01021};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=HIS3_NOCSJ
S3-16-all-fractions_k255_4335228_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11907..12512
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XW57_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23546.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4335228_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12555..12755
DNA (201bp) protein (67aa)
Membrane protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SL47_NOCSJ
mambrane protein
Membrane protein {ECO:0000313|EMBL:ABL82532.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_4335228_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12824..13621
DNA (798bp) protein (266aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=TRPC_NOCSJ
S3-16-all-fractions_k255_4335228_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13618..14853
DNA (1236bp) protein (412aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Nocardioides sp. CF8 RepID=R7XW36_9ACTO
S3-16-all-fractions_k255_4335228_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14850..15656
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Nocardioides sp. CF8 RepID=R7XX11_9ACTO
S3-16-all-fractions_k255_4335228_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15643..16242
DNA (600bp) protein (200aa)
Electron transport protein SCO1/SenC n=1 Tax=Nocardioides sp. CF8 RepID=R7XW62_9ACTO
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EON23551.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
electron transport protein SCO1/SenC
S3-16-all-fractions_k255_4335228_19
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16239..17288
DNA (1050bp) protein (350aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Nocardioides sp. CF8 RepID=R7XW21_9ACTO
prolipoprotein diacylglyceryl transferase
S3-16-all-fractions_k255_4335228_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17426..18307
DNA (882bp) protein (294aa)
glutamate synthase (NADH) large subunit (EC:1.4.1.14)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:ABL82524.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABL82524.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Glutamate synthase (NADH) large subunit n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SL39_NOCSJ
Displaying 20 items

View Taxonomy