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S3-16-all-fractions_k255_6421932

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_6421932_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..947
DNA (945bp) protein (315aa)
vesicle-fusing ATPase (EC:3.6.4.6)
Proteasome-associated ATPase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXL8_9ACTO
Proteasome-associated ATPase {ECO:0000256|SAAS:SAAS00216588}; AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
S3-16-all-fractions_k255_6421932_2
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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955..1302
DNA (348bp) protein (116aa)
Putative integral membrane protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UQY7_9ACTO
Putative integral membrane protein {ECO:0000313|EMBL:EGD44499.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
S3-16-all-fractions_k255_6421932_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1487..2110)
DNA (624bp) protein (208aa)
Methyltransferase type 11 n=1 Tax=Nocardioides sp. CF8 RepID=R7XYG6_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:EON24050.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
type 11 methyltransferase
S3-16-all-fractions_k255_6421932_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2114..3634
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SK11_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82146.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_6421932_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3724..3921
DNA (198bp) protein (66aa)
Prokaryotic ubiquitin-like protein Pup n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=PUP_NOCSJ
ubiquitin
Prokaryotic ubiquitin-like protein Pup {ECO:0000313|EMBL:AIY17500.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_6421932_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3918..4751
DNA (834bp) protein (278aa)
proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PrcB {ECO:0000256|HAMAP-Rule:MF_02113}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Proteasome subunit beta n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=PSB_NOCSJ
S3-16-all-fractions_k255_6421932_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4765..5709
DNA (945bp) protein (315aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PrcA {ECO:0000256|HAMAP-Rule:MF_00289}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
20S proteasome, A and B subunits n=1 Tax=Nocardioides sp. CF8 RepID=R7XXM1_9ACTO
proteasome subunit alpha
S3-16-all-fractions_k255_6421932_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5762..6409
DNA (648bp) protein (216aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Pup--protein ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYH1_9ACTO
hypothetical protein
Displaying 8 items

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