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S3-16-all-fractions_k255_182169_13

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: comp(8729..10555)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 605.0
  • Bit_score: 664
  • Evalue 7.80e-188
Transcription termination factor Rho n=1 Tax=Nocardioides sp. CF8 RepID=R7XYY2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 605.0
  • Bit_score: 664
  • Evalue 5.60e-188
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 577.0
  • Bit_score: 610
  • Evalue 2.70e-172

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Taxonomy

Nocardioides sp. CF8 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1827
GTGGCGAAGAAGCCCGCCAAGAAGGCTGCTTCGAAGTCGGCCGGCCTCAGCTCGATGCTGCTCGCCGACCTCAAGTCGATGGCCGCTGGCCTGGGCGTCTCCGGCGCCGGGTCGATGAAGAAGGCCCAGCTGGTCGACGCCATCAAGGCGACCCAGTCCGGTTCGTCGGCCAGGACCGAGAAGGCAGCGCAGCCCACGAAGGCCGAGCAGCCCGCCCAGGCCGAGCAGCCCGCCCAGGCCGAGCAGCCGCACGCCGAGCAACCACGCGCCGAGCAGACCGCCCAGCCGACGGTGCGCACCCGCACCCGCAAGCAGCGCCAGGTCGAGCAGGCCGAGCAGTCTGCCCGGGCCGAGCAGGCCGAGCAGCCCGCACCCCAGCAGGACCGGAAGCAGCAGGACCAGAAGCAGCAGGACCAGAAGCAGCAGGACCAGAAGCAGGGCCAGAAGCAGAACCAGGCCAAGCAGAACCAGCAGAGCCAGAACCAGTCGGGCCAGGCCAAACAGGACCGGCCGGACCGGCAGGACCGCCAGGACCGGCAGGACCGCCAGGACCAGCAGAACCGCCAGGACCAGCAGAACCGCCAGGACCAGCAGAACCGCCAGGACCAGCAGAACCGCCAGGACCAGAACCAGCAGAACCAGGCCGACGACGAGGACGACGAGGGCGGCGGCCGCCGCAACCGCCGCCGTCGCGGCCGCGACCGGACGACCGTGCGCGCCAGCGGTCGCAACGAGCCCGACACCACGATCCTCGAGGACGACGTCCTGGTCCCGGCCGCGGGCATCCTCGACGTGCTCGACAACTGCGCGTTCGTCCGCACCTCGGGCTACCTCCCCGGTCCCGAGGACGTCTACCTCTCGCTGTCGATGGTGCGGAAGTACCACCTGCGCCGTGGCGACGCGGTCGTCGGTCAGGTGCGCCAGCCGCGCGAGGGCGAGCGTCGGGAGAAGTTCAACCCGATGGTCCGCATCGACAGCGTCAACGGCACGGAGGCCGAGGGCGCCAAGGAGCGCCCCGAGTTCGTCGACGCGGTGCCGGTGCACCCACACCAGCGCCTGCGCCTCGCGACCGACGACACCAACCTCATCGGCCGGGTCGTCGACATCGCCGCGCCGATCGGGAAGGGCCAGCGCGGCCTCGTGCTGGCGCCGCCGCGCACCGGGGCCACCTCGCTGCTGCAGTCGATCGCGCAGTCGGTGACCACCAACAACCCCGAGTGCCACGTGATGGTGGTCCTGGTGGACACCCGTCCCGAGGAGGTCACCGACTTCCAGCGCCTGGTGAAGGGCGAGGTCGTCGCGTCGACCTTCGACCGTCAGCCGGCCGACCACACCCTGGTCGCCGAGCTGGCCATCGAGCGCGCGAAGCGGCTCGTCGAGCTGGGCCACGACGTGGTCGTGCTGCTCGACTCGCTGACCCGTCTGGGCCGGGCCTACAACCTGGCCGCCCCGGCCAACGGCCGCGTGCTCGGCGGGCTGGTCGACGCCTCGGCGGTCCACCCGACCAAGGAGTTCTTCGGCGCGGCCCGCAAGCTCGAGGACGCCGGGTCGCTGACGATCCTGGCGACGGTGAGCGTGGGCACCGGGTCGGCCACCGACGAGTTCTTCCTGGAGGAGCTCGCCGGGAGCGCGAACCTCGAGCTGGTGCTCAGCGCGGACCGCGCGGCGAAGGGAATCGTGCCTGCCGTGGACGTGGCCGCCTCGGGCACCCGCCACGAGGAGAAGCTGCTCGCGCCCGCCGAGGGAGCCGTGGTCGGCAACCTGCGCAAGCAGCTCGCCGCCGCCGACTCCCCGCAGGCGGTGACGAAGCTCGTCGGCTCCCGCTGA
PROTEIN sequence
Length: 609
VAKKPAKKAASKSAGLSSMLLADLKSMAAGLGVSGAGSMKKAQLVDAIKATQSGSSARTEKAAQPTKAEQPAQAEQPAQAEQPHAEQPRAEQTAQPTVRTRTRKQRQVEQAEQSARAEQAEQPAPQQDRKQQDQKQQDQKQQDQKQGQKQNQAKQNQQSQNQSGQAKQDRPDRQDRQDRQDRQDQQNRQDQQNRQDQQNRQDQQNRQDQNQQNQADDEDDEGGGRRNRRRRGRDRTTVRASGRNEPDTTILEDDVLVPAAGILDVLDNCAFVRTSGYLPGPEDVYLSLSMVRKYHLRRGDAVVGQVRQPREGERREKFNPMVRIDSVNGTEAEGAKERPEFVDAVPVHPHQRLRLATDDTNLIGRVVDIAAPIGKGQRGLVLAPPRTGATSLLQSIAQSVTTNNPECHVMVVLVDTRPEEVTDFQRLVKGEVVASTFDRQPADHTLVAELAIERAKRLVELGHDVVVLLDSLTRLGRAYNLAAPANGRVLGGLVDASAVHPTKEFFGAARKLEDAGSLTILATVSVGTGSATDEFFLEELAGSANLELVLSADRAAKGIVPAVDVAASGTRHEEKLLAPAEGAVVGNLRKQLAAADSPQAVTKLVGSR*