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S3-16-all-fractions_k255_182169

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_182169_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1070)
DNA (1068bp) protein (356aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ATP synthase subunit alpha n=1 Tax=Nocardioides sp. CF8 RepID=R7XZQ5_9ACTO
ATP synthase F0F1 subunit alpha
S3-16-all-fractions_k255_182169_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1127..1921)
DNA (795bp) protein (265aa)
ATP synthase subunit delta n=1 Tax=Nocardioides sp. CF8 RepID=R7XYV2_9ACTO
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
ATP synthase subunit delta
S3-16-all-fractions_k255_182169_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1921..2502)
DNA (582bp) protein (194aa)
ATP synthase subunit b n=1 Tax=Nocardioides sp. CF8 RepID=R7XYZ2_9ACTO
ATP synthase F0F1 subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_182169_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2534..2752)
DNA (219bp) protein (73aa)
ATP synthase subunit c n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=ATPL_NOCSJ
ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_182169_5
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2819..3613)
DNA (795bp) protein (265aa)
ATP synthase subunit a n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=ATP6_NOCSJ
ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_182169_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3618..3866)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHI4_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81269.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_182169_7
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3896..4375)
DNA (480bp) protein (160aa)
Putative ATP synthase protein I n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHI3_NOCSJ
putative ATP synthase protein I
Putative ATP synthase protein I {ECO:0000313|EMBL:ABL81268.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_182169_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4452..5666)
DNA (1215bp) protein (405aa)
Glycosyl transferase family protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYU7_9ACTO
Glycosyl transferase family protein {ECO:0000313|EMBL:EON24509.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
glycosyl transferase family protein
S3-16-all-fractions_k255_182169_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5669..6334)
DNA (666bp) protein (222aa)
Translation factor SUA5 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHI1_NOCSJ
translation factor SUA5
Translation factor SUA5 {ECO:0000313|EMBL:ABL81266.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_182169_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6331..7167)
DNA (837bp) protein (279aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Release factor glutamine methyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHI0_NOCSJ
HemK family modification methylase
S3-16-all-fractions_k255_182169_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7168..8241)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RF1_NOCSJ
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:AIY17062.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_182169_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8350..8583)
DNA (234bp) protein (78aa)
50S ribosomal protein L31 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=RL31_NOCSJ
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_182169_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8729..10555)
DNA (1827bp) protein (609aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Transcription termination factor Rho n=1 Tax=Nocardioides sp. CF8 RepID=R7XYY2_9ACTO
transcription termination factor Rho
S3-16-all-fractions_k255_182169_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10763..11662)
DNA (900bp) protein (300aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZ20_9ACTO
S3-16-all-fractions_k255_182169_15
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11665..12732)
DNA (1068bp) protein (356aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYU5_9ACTO
S3-16-all-fractions_k255_182169_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12729..14042)
DNA (1314bp) protein (438aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Homoserine dehydrogenase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYZ5_9ACTO
homoserine dehydrogenase
S3-16-all-fractions_k255_182169_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14039..15442)
DNA (1404bp) protein (468aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZT0_9ACTO
S3-16-all-fractions_k255_182169_18
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15446..17101)
DNA (1656bp) protein (552aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Arginine--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYX7_9ACTO
arginyl-tRNA synthetase
S3-16-all-fractions_k255_182169_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17197..17694
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPB2_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83647.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_182169_20
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18042..19448
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XZ16_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24538.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_182169_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19455..20360)
DNA (906bp) protein (302aa)
Cell envelope-related transcriptional n=1 Tax=Nocardioides sp. CF8 RepID=R7XYU1_9ACTO
Cell envelope-related transcriptional {ECO:0000313|EMBL:EON24537.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
cell envelope-related transcriptional attenuator
S3-16-all-fractions_k255_182169_22
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20360..20971)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYZ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24536.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_182169_23
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21128..23566
DNA (2439bp) protein (813aa)
kgd; alpha-ketoglutarate decarboxylase (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:ABL81250.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ABL81250.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHG5_NOCSJ
Displaying 23 items

View Taxonomy