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S3-16-all-fractions_k255_4339848_13

Organism: S3-16-all-fractions_metab_conc_63

near complete RP 49 / 55 MC: 2 BSCG 47 / 51 MC: 6 ASCG 14 / 38 MC: 1
Location: 15199..15732

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ2_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 160.0
  • Bit_score: 147
  • Evalue 8.70e-33
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM67418.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 165.0
  • Bit_score: 152
  • Evalue 2.90e-34
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 162.0
  • Bit_score: 150
  • Evalue 3.80e-34

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Taxonomy

Micromonospora sp. M42 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGATGCAGACACTGTGATCATCGGTCGGCCGTGGGCAGCGGACGACCATCCGTCCCTGCGCGACGTGTTCGACGTGAGCTACCGCCGCCTGGTCGTGCAGCTGTACGGCGTGACCGGCAACTTGGACGAGGCGGAGGACCTGGTGCAGGAGGCCTTCGTCCGGGCCGCAGCCTCTGGACGGCGCTTCGGCCACGTCCAGAACCCGGAGGCCTGGCTGCGGACGACGGCGATCAACCAGCACCGCAGCCGTTGGCGCAAGCTGCGCAACGGCCAGCGGGCGCGCGCACGCATGCTGCCTCCGCGCGACCCCGAGGCCCTCGAGTCACACCTGGAGATCATCACGGCGCTGCGCGCCCTTCCTGAGGCCCAGCGGCAGGTGATCGCACTGCACTACCTCGCGGACCTGCCCGTCGAGACGATCGCCGAGGAGCTCGGCATCCCGCCCGGCACGGTGAAGTCCCGACTGAGCCGGGGCCGCGACGCGCTCGCGGCCCACCTCGCGTACGCCGAAGGAGGCGTGGACCATGTCTGA
PROTEIN sequence
Length: 178
MDADTVIIGRPWAADDHPSLRDVFDVSYRRLVVQLYGVTGNLDEAEDLVQEAFVRAAASGRRFGHVQNPEAWLRTTAINQHRSRWRKLRNGQRARARMLPPRDPEALESHLEIITALRALPEAQRQVIALHYLADLPVETIAEELGIPPGTVKSRLSRGRDALAAHLAYAEGGVDHV*