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S3-16-all-fractions_k255_4339848

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4339848_1
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1514)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00036A3D31
Ligand-binding membrane protein {ECO:0000313|EMBL:EIF93091.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
S3-16-all-fractions_k255_4339848_2
Verrucosispora sp. MS100047, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1526..3073)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00037E37B5
SARP family transcriptional regulator
SARP family transcriptional regulator {ECO:0000313|EMBL:AIS85426.1}; TaxID=1410949 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora sp. MS100047.;"
S3-16-all-fractions_k255_4339848_3
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3324..3518
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3FA92
Uncharacterized protein {ECO:0000313|EMBL:KGN31299.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
S3-16-all-fractions_k255_4339848_4
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3608..3820
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN31298.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
S3-16-all-fractions_k255_4339848_5
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3897..6197
DNA (2301bp) protein (767aa)
ATPase involved in chromosome partitioning n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MBI0_ARTPP
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:ADX71862.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
S3-16-all-fractions_k255_4339848_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6194..7030
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B492E0
Uncharacterized protein {ECO:0000313|EMBL:EWT06782.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
G2/mitotic-specific cyclin-B1
S3-16-all-fractions_k255_4339848_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7037..9682)
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XT32_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22461.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4339848_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9745..10464)
DNA (720bp) protein (240aa)
ABC transporter-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSY7_9ACTO
ABC transporter-like protein {ECO:0000313|EMBL:EON22462.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
macrolide ABC transporter ATP-binding protein
S3-16-all-fractions_k255_4339848_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10461..11099)
DNA (639bp) protein (213aa)
PadR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XT31_9ACTO
PadR family transcriptional regulator {ECO:0000313|EMBL:EON22463.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
putative PadR family transcriptional regulator
S3-16-all-fractions_k255_4339848_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11270..12844)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XTW2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON22465.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4339848_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12828..13532)
DNA (705bp) protein (235aa)
ABC transporter-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XT37_9ACTO
ABC transporter-like protein {ECO:0000313|EMBL:EON22466.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4339848_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13676..15031
DNA (1356bp) protein (452aa)
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ2_NOCSJ
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM67418.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
sigma-70 factor
S3-16-all-fractions_k255_4339848_13
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15199..15732
DNA (534bp) protein (178aa)
Sigma-70, region 4 type 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMQ2_NOCSJ
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM67418.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
RNA polymerase sigma24 factor
S3-16-all-fractions_k255_4339848_14
unknown

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15725..16570
DNA (846bp) protein (282aa)

This feature has no annotations

S3-16-all-fractions_k255_4339848_15
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16581..18803)
DNA (2223bp) protein (741aa)
short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABL84059.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABL84059.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQH4_NOCSJ
S3-16-all-fractions_k255_4339848_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18966..19298)
DNA (333bp) protein (111aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABL84060.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABL84060.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Acetyl-CoA acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQH5_NOCSJ
Displaying 16 items

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