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S3-18-all-fractions_k255_3231060

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3231060_1
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..1372)
DNA (1371bp) protein (457aa)
Glycine betaine/L-proline ABC transporter permease and substrate-binding protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2B6_MYXSD id=5224892 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:AKH37723.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
ABC-type glycine betaine transport, periplasmic subunit
S3-18-all-fractions_k255_3231060_2
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1401..2135)
DNA (735bp) protein (245aa)
Glycine betaine/L-proline transport ATP binding subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WB83_RHILT
Uncharacterized protein {ECO:0000313|EMBL:AKH39519.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
ABC transporter related protein
S3-18-all-fractions_k255_3231060_3
unknown

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comp(2163..2480)
DNA (318bp) protein (106aa)

This feature has no annotations

S3-18-all-fractions_k255_3231060_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(2480..4003)
DNA (1524bp) protein (508aa)
Divalent anion:Na+ symporter, DASS family n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF6_9BACT
Divalent anion:Na+ symporter, DASS family {ECO:0000313|EMBL:BAL54892.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
anion transporter
S3-18-all-fractions_k255_3231060_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4516..5058
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5055..5852
DNA (798bp) protein (266aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87844.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5864..7324
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3231060_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7339..8619
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88956.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8616..9416
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9630..10688)
DNA (1059bp) protein (353aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092B4_STIAD
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S3-18-all-fractions_k255_3231060_11
R_NC10_66_22, NC10, Bacteria

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comp(10930..11541)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SM69_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S3-18-all-fractions_k255_3231060_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11710..12597
DNA (888bp) protein (296aa)
D-alanine aminotransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PS8_SYMTH
D-alanine aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_3231060_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12636..13892
DNA (1257bp) protein (419aa)
Putative M20 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9D7_GEMAT
putative M20 family peptidase
Putative M20 family peptidase {ECO:0000313|EMBL:BAH39114.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3231060_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13916..15628
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90214.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15729..16688
DNA (960bp) protein (320aa)
hypothetical protein n=3 Tax=Aminicenantes RepID=UPI000382BA93
cyanophycinase
Cyanophycinase {ECO:0000313|EMBL:AHG93614.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16939..19947)
DNA (3009bp) protein (1003aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88005.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20356..22371
DNA (2016bp) protein (672aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88292.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_18

Not on your lists

comp(22374..22979)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=L7Y6Q0_9BACT
Transcriptional regulator {ECO:0000313|EMBL:AGD93302.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TetR family transcriptional regulator
S3-18-all-fractions_k255_3231060_19
unknown

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comp(22988..23566)
DNA (579bp) protein (193aa)

This feature has no annotations

S3-18-all-fractions_k255_3231060_20
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(23570..24070)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVA0_HALH1
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEE50226.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
S3-18-all-fractions_k255_3231060_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24067..24618)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92772.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3231060_22
bacterium UASB270, Bacteria

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comp(24725..25426)
DNA (702bp) protein (234aa)
M50 family peptidase {ECO:0000313|EMBL:GAK61682.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Peptidase M50 id=2657691 bin=GWF2_Planctomycetes_42_9 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
putative membrane-associated peptidase
S3-18-all-fractions_k255_3231060_23
unknown

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comp(25614..26060)
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying 23 items

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