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S3-18-all-fractions_k255_3362147

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3362147_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1011)
DNA (1011bp) protein (337aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:BAH39399.1}; EC=3.1.4.16 {ECO:0000313|EMBL:BAH39399.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ3_GEMAT
S3-18-all-fractions_k255_3362147_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1104..1844
DNA (741bp) protein (247aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uridine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ4_GEMAT
Uridine kinase
S3-18-all-fractions_k255_3362147_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1841..2563
DNA (723bp) protein (241aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:BAH39401.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3362147_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2607..4322
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
S3-18-all-fractions_k255_3362147_5
unknown

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4387..4761
DNA (375bp) protein (125aa)

This feature has no annotations

S3-18-all-fractions_k255_3362147_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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4763..6121
DNA (1359bp) protein (453aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_3362147_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6171..7205
DNA (1035bp) protein (345aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003779E30
pstS; phosphate ABC transporter substrate-binding protein
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3362147_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7313..8413
DNA (1101bp) protein (367aa)
Phosphate-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB01_GEMAT
pstS; phosphate ABC transporter substrate-binding protein
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3362147_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8410..9396
DNA (987bp) protein (329aa)
Phosphate ABC transporter membrane protein 1, PhoT family id=3269515 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
pstC; phosphate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_3362147_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9396..10325
DNA (930bp) protein (310aa)
phosphate ABC transporter permease n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035FD9C7
phosphate ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_3362147_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10312..11142
DNA (831bp) protein (277aa)
phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P338_9FIRM
Tax=RBG_16_Deltaproteobacteria_71_12_curated
S3-18-all-fractions_k255_3362147_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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11139..12020
DNA (882bp) protein (294aa)
phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12555371 bin=CNBR_ACIDO species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter ATP-binding protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_3362147_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12017..12736
DNA (720bp) protein (240aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB06_GEMAT
phoU; phosphate transport system regulatory protein PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3362147_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12896..14371
DNA (1476bp) protein (492aa)
ppx; exopolyphosphatase (EC:3.6.1.11)
Exopolyphosphatase {ECO:0000313|EMBL:BAH39413.1}; EC=3.6.1.11 {ECO:0000313|EMBL:BAH39413.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Exopolyphosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB07_GEMAT
S3-18-all-fractions_k255_3362147_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14378..16516)
DNA (2139bp) protein (713aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Polyphosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB08_GEMAT
Polyphosphate kinase
S3-18-all-fractions_k255_3362147_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16637..17680)
DNA (1044bp) protein (348aa)
Low-affinity inorganic phosphate transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB09_GEMAT
pit; low-affinity inorganic phosphate transporter
Low-affinity inorganic phosphate transporter {ECO:0000313|EMBL:BAH39415.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3362147_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(17686..18297)
DNA (612bp) protein (204aa)
Putative Pit accessory protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB10_GEMAT
Putative phosphate transport regulator
Putative phosphate transport regulator {ECO:0000313|EMBL:AHG91383.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3362147_18
unknown

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comp(18441..18713)
DNA (273bp) protein (91aa)

This feature has no annotations

S3-18-all-fractions_k255_3362147_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(18877..19827)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003133413
deoxyribose-phosphate aldolase
Tax=RBG_16_Actinobacteria_67_10_curated
S3-18-all-fractions_k255_3362147_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(19824..20111)
DNA (288bp) protein (96aa)
Ethanolamine utilization protein EutN id=2215804 bin=GWB2_Elusimicrobium_63_22 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_3362147_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(20116..20460)
DNA (345bp) protein (115aa)
Ethanolamine utilization protein EutN/carboxysome structural protein CcmL n=1 Tax=uncultured bacterium RepID=K2DVL1_9BACT
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Tax=RBG_16_Actinobacteria_67_10_curated
S3-18-all-fractions_k255_3362147_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20502..21275)
DNA (774bp) protein (258aa)
peptidase, s54 (rhomboid) family (EC:3.4.21.-)
Peptidase, S54 (Rhomboid) family {ECO:0000313|EMBL:ADO75367.1}; EC=3.4.21.- {ECO:0000313|EMBL:ADO75367.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Peptidase, S54 (Rhomboid) family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FIM0_STIAD
S3-18-all-fractions_k255_3362147_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21481..23418
DNA (1938bp) protein (646aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Chaperone protein dnaK
S3-18-all-fractions_k255_3362147_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23693..25222
DNA (1530bp) protein (510aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
PDZ/DHR/GLGF domain protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AHG91386.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 24 items

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