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S3-18-all-fractions_k255_5145824

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5145824_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..607
DNA (606bp) protein (202aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q6_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89520.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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610..2505
DNA (1896bp) protein (632aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG89519.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2517..3737
DNA (1221bp) protein (407aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
MacB-like periplasmic core domain protein
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:AHG89518.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3836..4036)
DNA (201bp) protein (67aa)
CsbD-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8L8_NITMU
CsbD-like protein
CsbD-like protein {ECO:0000313|EMBL:ABB74903.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
S3-18-all-fractions_k255_5145824_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4562..5185
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D6F02B
transcriptional regulator PadR family protein
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AHG91188.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5345..7342
DNA (1998bp) protein (666aa)
Probable potassium transport system protein kup n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q5_GEMAT
Low affinity potassium transport system protein kup
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7689..8732)
DNA (1044bp) protein (348aa)
Glycoside hydrolase family 18 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y743_9SPHI
glycoside hydrolase family protein
Tax=GWA2_Ignavibacteria_54_16_curated
S3-18-all-fractions_k255_5145824_8
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8844..9917)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D1DD5
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:EMR01619.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
surface antigen
S3-18-all-fractions_k255_5145824_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10050..11699)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37562.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5145824_10
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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11854..12978
DNA (1125bp) protein (375aa)
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
S3-18-all-fractions_k255_5145824_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(12985..15144)
DNA (2160bp) protein (720aa)
Multi-sensor hybrid histidine kinase id=2779121 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PAS sensor protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_5145824_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15336..16778
DNA (1443bp) protein (481aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88956.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_13
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

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comp(17161..17586)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034A005C
Uncharacterized protein {ECO:0000313|EMBL:ELS01729.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
S3-18-all-fractions_k255_5145824_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(17652..20111)
DNA (2460bp) protein (820aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Leucine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q0_GEMAT
leucyl-tRNA synthetase class Ia
S3-18-all-fractions_k255_5145824_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20351..22483
DNA (2133bp) protein (711aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GTC5_SELRL
mcp; putative methyl-accepting chemotaxis protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_5145824_16
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(22466..23803)
DNA (1338bp) protein (446aa)
Peptidase M23 n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LIV2_9BACT
Peptidase M23 {ECO:0000313|EMBL:EJF09288.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
peptidase M23
S3-18-all-fractions_k255_5145824_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23958..25109)
DNA (1152bp) protein (384aa)
peptidase T2 asparaginase 2
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:AHG89954.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
asparaginase id=24394921 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
S3-18-all-fractions_k255_5145824_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25194..26051)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HJZ4_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89403.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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26284..27612
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY71_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03657.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S3-18-all-fractions_k255_5145824_20
CSP1_5_NC10, NC10, Bacteria

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27605..28588
DNA (984bp) protein (328aa)
methyltransferase id=14430828 bin=bin3_NC10 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S3-18-all-fractions_k255_5145824_21
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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28585..29910
DNA (1326bp) protein (442aa)
Glutamate-cysteine ligase 2 family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7LEV1_NOCAA
glutamate-cysteine ligase 2 family protein
Glutamate-cysteine ligase 2 family protein {ECO:0000313|EMBL:AFR09047.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
S3-18-all-fractions_k255_5145824_22
unknown

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30122..30244
DNA (123bp) protein (41aa)

This feature has no annotations

S3-18-all-fractions_k255_5145824_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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30333..31304
DNA (972bp) protein (324aa)
Sugar kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K3_GEMAT
GHMP kinase
GHMP kinase {ECO:0000313|EMBL:AHG89912.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5145824_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

31323..31538
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37511.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5145824_25

Not on your lists

31535..32185
DNA (651bp) protein (217aa)
Ribonuclease H {ECO:0000313|EMBL:ACV72187.1}; EC=3.1.26.4 {ECO:0000313|EMBL:ACV72187.1};; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Ribonuclease H n=1 Tax=uncultured organism RepID=E0X765_9ZZZZ
ribonuclease H
S3-18-all-fractions_k255_5145824_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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32214..32396
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37509.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5145824_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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32574..33188
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J8_GEMAT
Double zinc ribbon
Double zinc ribbon {ECO:0000313|EMBL:AHG89907.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 27 items

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