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S3-18-all-fractions_k255_47542

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_47542_1
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(251..457)
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCN0_DESAR
cold-shock DNA-binding domain-containing protein
Tax=RBG_13_Caldithrix_44_9_curated
S3-18-all-fractions_k255_47542_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

898..1560
DNA (663bp) protein (221aa)
UPF0502 protein Gmet_0262 n=2 Tax=Geobacter metallireducens RepID=Y262_GEOMG
hypothetical protein
UPF0502 protein Gmet_0262 {ECO:0000255|HAMAP-Rule:MF_01584}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S3-18-all-fractions_k255_47542_3
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1564..3192)
DNA (1629bp) protein (543aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NQN5_MARHT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB11973.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
S3-18-all-fractions_k255_47542_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3409..4728
DNA (1320bp) protein (440aa)
amidohydrolase (EC:3.5.1.14)
M20 family peptidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0J2_9PROT
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_47542_5
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4733..6349
DNA (1617bp) protein (539aa)
Phosphoenolpyruvate carboxykinase [ATP] id=4526631 bin=GWC2_Pelobacter_58_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphoenolpyruvate carboxykinase
Tax=GWC2_Pelobacteraceae_58_13_curated
S3-18-all-fractions_k255_47542_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6448..8445)
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A6202
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
S3-18-all-fractions_k255_47542_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8735..11668)
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A6202
diguanylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
S3-18-all-fractions_k255_47542_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11837..12391
DNA (555bp) protein (185aa)
Thioesterase superfamily id=3196379 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
thioesterase superfamily protein
Tax=GWB1_Bdellovibrionales_55_8_curated
S3-18-all-fractions_k255_47542_9
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(12399..13928)
DNA (1530bp) protein (510aa)
tRNA sulfurtransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVC3_9BACT
thiamine biosynthesis/tRNA modification protein ThiI
Tax=RBG_16_KB1_OP1_55_9_curated
S3-18-all-fractions_k255_47542_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13957..16677)
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDV2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_47542_11
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(16863..17084)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFQ6_9BACT
iron-binding protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
S3-18-all-fractions_k255_47542_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17151..18206
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H971_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89558.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
S3-18-all-fractions_k255_47542_13
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18207..19376
DNA (1170bp) protein (390aa)
selenocysteine lyase id=14623941 bin=bin5_DeltaP species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin5_DeltaP organism_group=Deltaproteobacteria
class V aminotransferase
Tax=CSP1_8_Deltaproteobacteria
S3-18-all-fractions_k255_47542_14
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19510..21993)
DNA (2484bp) protein (828aa)
Peptidase lipoprotein, M48 family n=2 Tax=Geobacter sulfurreducens RepID=D7AIM2_GEOSK
peptidase M48
Peptidase M48 {ECO:0000313|EMBL:AJE03753.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S3-18-all-fractions_k255_47542_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21980..22429)
DNA (450bp) protein (150aa)
septum formation initiator; K05589 cell division protein FtsB id=14627999 bin=bin7_NC10_sister species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
septum formation initiator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
S3-18-all-fractions_k255_47542_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22426..23751)
DNA (1326bp) protein (442aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3Y9_STRRD
S3-18-all-fractions_k255_47542_17
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

23936..24571
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q115P2_TRIEI
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY46461.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
S3-18-all-fractions_k255_47542_18
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24610..26064
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q114X3_TRIEI
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
S3-18-all-fractions_k255_47542_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26061..27446
DNA (1386bp) protein (462aa)
Sulfatase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMN2_DESAA
sulfatase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
S3-18-all-fractions_k255_47542_20
unknown

Not on your lists

comp(27434..27952)
DNA (519bp) protein (173aa)

This feature has no annotations

S3-18-all-fractions_k255_47542_21
Photobacterium halotolerans, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28027..28773)
DNA (747bp) protein (249aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S6Z7_9CYAN
TrmH family RNA methyltransferase
S3-18-all-fractions_k255_47542_22
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

28854..29162
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7M6_DESTA
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_47542_23
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29269..29853)
DNA (585bp) protein (195aa)
Maf-like protein Anae109_1366 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=Y1366_ANADF
maf protein
Maf-like protein Anae109_1366 {ECO:0000255|HAMAP-Rule:MF_00528}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S3-18-all-fractions_k255_47542_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29922..30785
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035C75DF
Uncharacterized protein {ECO:0000313|EMBL:EYR67097.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RNA polymerase ECF-type sigma factor
S3-18-all-fractions_k255_47542_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30909..31427)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3W2_VARPE
Protein of unknown function DUF2231, transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG91578.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_47542_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(31635..33101)
DNA (1467bp) protein (489aa)
gltX1; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F761_ACIC5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S3-18-all-fractions_k255_47542_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

33194..34114
DNA (921bp) protein (307aa)
UspA domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHE5_RHOM4
UspA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S3-18-all-fractions_k255_47542_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(34135..35493)
DNA (1359bp) protein (453aa)
Aldehyde Dehydrogenase n=2 Tax=Rhodothermus marinus RepID=D0MKH7_RHOM4 id=5225821 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aldehyde dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_47542_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

35758..37770
DNA (2013bp) protein (671aa)
cbbT; transketolase (TK) (EC:2.2.1.1)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996, ECO:0000313|EMBL:CBE69724.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
S3-18-all-fractions_k255_47542_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37881..38486)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXV4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95552.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 35 in total

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