ggKbase home page

S3-18-all-fractions_k255_501145

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_501145_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..981)
DNA (981bp) protein (327aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYA0_9GAMM
dTDP-glucose 4,6-dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_501145_2
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1021..1854
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
UDP pyrophosphate phosphatase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255A491
S3-18-all-fractions_k255_501145_3
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..2666)
DNA (558bp) protein (186aa)
membrane protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B5970B
lipoprotein transmembrane
Putative lipoprotein transmembrane {ECO:0000313|EMBL:EGB13543.1}; Flags: Precursor;; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
S3-18-all-fractions_k255_501145_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2802..3410
DNA (609bp) protein (203aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase ECF-type sigma factor
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_501145_5
unknown

Not on your lists

3436..3987
DNA (552bp) protein (184aa)

This feature has no annotations

S3-18-all-fractions_k255_501145_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3971..5602
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QNS8_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_501145_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5406..7166)
DNA (1761bp) protein (587aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM30_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:AKF06752.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Hypothetical Protein
S3-18-all-fractions_k255_501145_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7187..10426)
DNA (3240bp) protein (1080aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase id=2245681 bin=GWB2_Deltaproteobacteria_65_81 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S3-18-all-fractions_k255_501145_9
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10423..11382)
DNA (960bp) protein (320aa)
idsA; Short chain isoprenyl diphosphate synthase (EC:2.5.1.-)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GC26_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76588.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
S3-18-all-fractions_k255_501145_10
unknown

Not on your lists

comp(11491..11679)
DNA (189bp) protein (63aa)

This feature has no annotations

S3-18-all-fractions_k255_501145_11
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12073..13023)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GC26_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76588.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
geranylgeranyl pyrophosphate synthase
S3-18-all-fractions_k255_501145_12
unknown

Not on your lists

comp(13139..13324)
DNA (186bp) protein (62aa)

This feature has no annotations

S3-18-all-fractions_k255_501145_13
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13618..14838)
DNA (1221bp) protein (407aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z370_9NEIS
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Deltaproteobacteria_71_12_curated
S3-18-all-fractions_k255_501145_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14895..17105)
DNA (2211bp) protein (737aa)
exodeoxyribonuclease v alpha chain (EC:3.1.11.5)
Exodeoxyribonuclease V alpha chain n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FJI8_STIAD
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S3-18-all-fractions_k255_501145_15
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

17185..18579
DNA (1395bp) protein (465aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53498.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=2246735 bin=GWB2_Deltaproteobacteria_65_81 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
two component, sigma54 specific, transcriptional regulator, Fis family
S3-18-all-fractions_k255_501145_16
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

18590..18805
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53499.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S3-18-all-fractions_k255_501145_17
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18805..19542
DNA (738bp) protein (246aa)
Pyridoxine 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00279}; Short=PNP synthase {ECO:0000255|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000255|HAMAP-Rule:MF_00279};; TaxID=321327 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=PDXJ_SYNJA
pdxJ; pyridoxine 5'-phosphate synthase
S3-18-all-fractions_k255_501145_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19552..20949)
DNA (1398bp) protein (466aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
Phosphoglucosamine mutase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NV95_GRAMM
phosphoglucosamine mutase
S3-18-all-fractions_k255_501145_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(20946..21632)
DNA (687bp) protein (229aa)
YbbR family protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZZ3_DESAT
YbbR family protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_501145_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21629..22414)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZZ4_DESAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_501145_21
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22411..23337)
DNA (927bp) protein (309aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Dihydropteroate synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCU3_ANADF
dihydropteroate synthase
S3-18-all-fractions_k255_501145_22
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(23462..24589)
DNA (1128bp) protein (376aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IM58_LEPFC
ftsH; cell division protein
Displaying 22 items

View Taxonomy