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S3-18-all-fractions_k255_3766160

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3766160_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

66..863
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=K0DVC7_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_3766160_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

885..1325
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_3766160_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1426..2793
DNA (1368bp) protein (456aa)
UPI0003CFD894 related cluster n=1 Tax=unknown RepID=UPI0003CFD894
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
S3-18-all-fractions_k255_3766160_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2790..3734
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XP39_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36679.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
S3-18-all-fractions_k255_3766160_5
unknown

Not on your lists

comp(3754..5103)
DNA (1350bp) protein (450aa)

This feature has no annotations

S3-18-all-fractions_k255_3766160_6
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5291..7885
DNA (2595bp) protein (865aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037C3C27
putative TonB-dependent outer membrane receptor
Putative TonB-dependent outer membrane receptor {ECO:0000313|EMBL:ABM01099.1}; Flags: Precursor;; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensis (strain ATCC BAA-1098 / SB2B).;"
S3-18-all-fractions_k255_3766160_7
unknown

Not on your lists

7894..9513
DNA (1620bp) protein (540aa)

This feature has no annotations

S3-18-all-fractions_k255_3766160_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9568..10131
DNA (564bp) protein (188aa)
DNA glycosylase n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000362B097
mug; putative G/U mismatch-specific DNA glycosylase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
S3-18-all-fractions_k255_3766160_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10132..10503
DNA (372bp) protein (124aa)
Methylmalonyl-CoA epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ8_KORVE
methylmalonyl-CoA epimerase
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_3766160_10
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10500..11108
DNA (609bp) protein (203aa)
Glycoside hydrolase family 25 n=1 Tax=Cellvibrio sp. BR RepID=I3ID48_9GAMM
Glycoside hydrolase family 25 {ECO:0000313|EMBL:EIK45983.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
lysozyme M1
S3-18-all-fractions_k255_3766160_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11116..13215)
DNA (2100bp) protein (700aa)
prolyl oligopeptidase family protein (EC:3.4.-.-)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rheinheimera sp. A13L RepID=F7NZ42_9GAMM id=5225010 bin=16ft_combo_ws3_JS1 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_3766160_12
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13614..14912
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B951_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERI51696.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
hypothetical protein with glutamic acid-rich region profile
S3-18-all-fractions_k255_3766160_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14994..16253
DNA (1260bp) protein (420aa)
twitching motility protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3E9CC
twitching motility protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_3766160_14
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16250..16756
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6A0CE
Rhs protein {ECO:0000313|EMBL:KHN93108.1}; TaxID=1507808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. actinidiae.;"
hypothetical protein
S3-18-all-fractions_k255_3766160_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16794..17132
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Serratia marcescens FGI94 RepID=L0MGP3_SERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB83058.1}; TaxID=1249634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens FGI94.;"
S3-18-all-fractions_k255_3766160_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17134..19005
DNA (1872bp) protein (624aa)
NAD synthetase (EC:6.3.5.1)
Putative NAD synthetase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9G5_SORC5
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S3-18-all-fractions_k255_3766160_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19021..20370
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
GGDEF domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXY3_CORCM
resE7; diguanylate cyclase
S3-18-all-fractions_k255_3766160_18
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20206..21834)
DNA (1629bp) protein (543aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3T2_9PROT
Diguanylate cyclase {ECO:0000313|EMBL:KGF72090.1}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
response regulator receiver modulated diguanylate cyclase
S3-18-all-fractions_k255_3766160_19
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(21839..22261)
DNA (423bp) protein (141aa)
Response regulator receiver protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=B9LG86_CHLSY
response regulator receiver protein
Response regulator receiver {ECO:0000313|EMBL:ABY36975.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
S3-18-all-fractions_k255_3766160_20
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

22333..23082
DNA (750bp) protein (250aa)
Putative OmpR family two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1V3_CALAS
putative OmpR family two-component response regulator
Putative OmpR family two-component response regulator {ECO:0000313|EMBL:BAL99240.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
S3-18-all-fractions_k255_3766160_21
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

23079..25034
DNA (1956bp) protein (652aa)
Serine/threonine protein kinase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRC2_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:KDA53162.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
serine/threonine protein kinase
S3-18-all-fractions_k255_3766160_22
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25041..26741)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1YG92_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EJI86970.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
S3-18-all-fractions_k255_3766160_23
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26912..28033
DNA (1122bp) protein (374aa)
Response regulator receiver protein id=4714141 bin=GWC2_Pelobacter_58_13 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
S3-18-all-fractions_k255_3766160_24
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28039..29631)
DNA (1593bp) protein (531aa)
Peptidase M28 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMF9_KORVE
peptidase M28
NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96240.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
S3-18-all-fractions_k255_3766160_25
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29694..30647
DNA (954bp) protein (318aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U718_DESML
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EPR44920.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
S3-18-all-fractions_k255_3766160_26
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30887..32161
DNA (1275bp) protein (425aa)
metallophosphoesterase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B15B
DNA repair exonuclease
DNA repair exonuclease {ECO:0000313|EMBL:AFL76421.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
S3-18-all-fractions_k255_3766160_27
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32158..35634
DNA (3477bp) protein (1159aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000377AD9A
Uncharacterized protein {ECO:0000313|EMBL:KIH76500.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
Displaying 27 items

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