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13_1_20cm_full_scaffold_1084

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1084_1
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Frankia sp. CN3 RepID=G6HN48_9ACTO
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ADP79485.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_20cm_full_scaffold_1084_2
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(207..560)
DNA (354bp) protein (118aa)
Regulatory protein ArsR n=1 Tax=Frankia sp. CN3 RepID=G6HN47_9ACTO
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP79484.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_20cm_full_scaffold_1084_3
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(686..1963)
DNA (1278bp) protein (426aa)
Transposase n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NIJ2_KYTSD rbh
Transposase {ECO:0000313|EMBL:CCH74451.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
transposase rbh
13_1_20cm_full_scaffold_1084_4
unknown

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comp(2052..2243)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_full_scaffold_1084_5
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2299..2763)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00035C7CEB
Cation-binding protein {ECO:0000313|EMBL:KJV43011.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp
hypothetical protein
13_1_20cm_full_scaffold_1084_6
unknown

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comp(2781..2876)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_full_scaffold_1084_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2858..3235)
DNA (378bp) protein (126aa)
choline dehydrogenase (EC:1.1.99.1)
Choline dehydrogenase {ECO:0000313|EMBL:AEA23626.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA23626.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;
Choline dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP67_PSEUX
13_1_20cm_full_scaffold_1084_8

Not on your lists

comp(3495..4322)
DNA (828bp) protein (276aa)
Resolvase domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1DA63_9ZZZZ
Resolvase domain protein {ECO:0000313|EMBL:EQD79055.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
recombinase family protein
13_1_20cm_full_scaffold_1084_9
unknown

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comp(4313..4522)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_full_scaffold_1084_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4701..7415
DNA (2715bp) protein (905aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003787ECF rbh
LuxR family transcriptional regulator
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:AEA27706.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
13_1_20cm_full_scaffold_1084_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8195..8581)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q143_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU71718.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
13_1_20cm_full_scaffold_1084_12
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9018..9686
DNA (669bp) protein (223aa)
NADP oxidoreductase n=1 Tax=Streptomyces rapamycinicus RepID=UPI000383053F
NADP oxidoreductase
NADP oxidoreductase {ECO:0000313|EMBL:AGP59422.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
13_1_20cm_full_scaffold_1084_13
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9843..10178
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVZ4_9ACTN
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1550399 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
anti-sigma factor antagonist
13_1_20cm_full_scaffold_1084_14
unknown

Not on your lists

comp(10332..11060)
DNA (729bp) protein (243aa)

This feature has no annotations

13_1_20cm_full_scaffold_1084_15
unknown

Not on your lists

comp(11100..11429)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_full_scaffold_1084_16
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11474..11950)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:CDS91620.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
13_1_20cm_full_scaffold_1084_17
Sutterella sp. CAG:351, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..12647
DNA (258bp) protein (86aa)
Universal stress family protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7IJ47_9BURK
Universal stress family protein {ECO:0000313|EMBL:CDE51774.1}; TaxID=1262975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;
UspA domain-containing protein
13_1_20cm_full_scaffold_1084_18
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12655..12939)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4RFN9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK32482.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
Displaying 18 items

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