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13_1_20cm_full_scaffold_1186

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1186_1
unknown

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2..277
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_full_scaffold_1186_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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274..999
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBY5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59782.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
13_1_20cm_full_scaffold_1186_3
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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996..1223
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WRK9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIF65899.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
13_1_20cm_full_scaffold_1186_4
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1220..1906
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82B62_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC73555.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
13_1_20cm_full_scaffold_1186_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(1922..3289)
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNR7_DESK7
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Fis family transcriptional regulator
13_1_20cm_full_scaffold_1186_6
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3286..3657)
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IAT2_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:EPE96378.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob
response regulator receiver protein
13_1_20cm_full_scaffold_1186_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3715..4341)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003757668
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:AKF04408.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" sourc
nodW; two-component nodulation response regulator protein
13_1_20cm_full_scaffold_1186_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4351..4965)
DNA (615bp) protein (205aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
histidine kinase n=1 Tax=Rhizobium mongolense RepID=UPI0003B40A4C
sensor histidine kinase protein
13_1_20cm_full_scaffold_1186_9
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4962..5381)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00037C0583
sensory box histidine kinase
Sensory box histidine kinase {ECO:0000313|EMBL:ABR91523.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthino
13_1_20cm_full_scaffold_1186_10
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5596..6210
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029AF720
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN54884.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
13_1_20cm_full_scaffold_1186_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6207..7475
DNA (1269bp) protein (423aa)
Putative aldo/keto reductase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HW02_AZOC5
aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:BAF90376.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium ca
13_1_20cm_full_scaffold_1186_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7472..8779
DNA (1308bp) protein (436aa)
Putative outer membrane macrolide efflux protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CKE9_MYXFH
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG91808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_1186_13
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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8790..11969
DNA (3180bp) protein (1060aa)
Gll0876 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM91_GLOVI
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
AcrB/AcrD/AcrF family multidrug efflux protein
13_1_20cm_full_scaffold_1186_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11966..12661
DNA (696bp) protein (232aa)
Gll0875 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM92_GLOVI
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG91806.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 14 items

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