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13_1_20cm_full_scaffold_1241

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1241_1
unknown

Not on your lists

2..523
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_full_scaffold_1241_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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523..1200
DNA (678bp) protein (226aa)
alias=16ft_combo_ws3_scaffold_1271_14 id=5223484 tax=16ft_combo_ws3
id=5223484 Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_20cm_full_scaffold_1241_3
unknown

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1211..1753
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_20cm_full_scaffold_1241_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1825..3930
DNA (2106bp) protein (702aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N0_GEMAT
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_full_scaffold_1241_5
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3937..4275)
DNA (339bp) protein (113aa)
Chaperonin csaA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYJ3_9RHOB
Chaperonin csaA {ECO:0000313|EMBL:EAV42189.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain
export-related chaperone CsaA
13_1_20cm_full_scaffold_1241_6
unknown

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4405..5067
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_20cm_full_scaffold_1241_7
unknown

Not on your lists

5216..7360
DNA (2145bp) protein (715aa)

This feature has no annotations

13_1_20cm_full_scaffold_1241_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7370..10408)
DNA (3039bp) protein (1013aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Deltaproteobacteria_48_10_curated
acriflavin resistance protein
13_1_20cm_full_scaffold_1241_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10405..11547)
DNA (1143bp) protein (381aa)
Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter metallireducens RepID=Q39V42_GEOMG
RND family efflux pump membrane fusion lipoprotein
Efflux pump, RND family, membrane fusion lipoprotein {ECO:0000313|EMBL:ABB31882.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
13_1_20cm_full_scaffold_1241_10
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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11753..13135
DNA (1383bp) protein (461aa)
Putative chaperone alias=gwe2_scaffold_8_833 id=2167989 tax=TA06 species=Ignavibacterium album JCM 16511 genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
Putative chaperone; K07391 magnesium chelatase family protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
comM; competence ATPase ComM
13_1_20cm_full_scaffold_1241_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13439..13789
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_1241_12
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(13796..15805)
DNA (2010bp) protein (670aa)
Sodium/hydrogen exchanger n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWN3_9BACT
sodium/hydrogen exchanger family/TrkA domain protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=CG_Nitrosp_02
Kef-type K+ transport system NAD-binding protein
13_1_20cm_full_scaffold_1241_13
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

15836..16756
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211
transporter, MscS family Tax=CG_OP9-01
mechanosensitive ion channel protein MscS
13_1_20cm_full_scaffold_1241_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(16753..18126)
DNA (1374bp) protein (458aa)
aromatic-L-amino-acid decarboxylase
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:AIE84362.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbrii
mlo:mlr4653 aromatic-L-amino-acid decarboxylase alias=RAAC39_AAC7_scaffold_758_7,RAAC39_C00039G00007 id=720766 tax=RAAC39 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria rbh
13_1_20cm_full_scaffold_1241_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(18194..18544)
DNA (351bp) protein (117aa)
ycdJ; arylesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
antibiotic biosynthesis monooxygenase alias=RBG9_39_114,RBG9_C00039G00114 id=1245775 tax=RBG9 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus
antibiotic biosynthesis monooxygenase
13_1_20cm_full_scaffold_1241_16
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18510..18875)
DNA (366bp) protein (122aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VC87_9DELT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EPR44289.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
conserved protein of unknown function
13_1_20cm_full_scaffold_1241_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18928..19443)
DNA (516bp) protein (172aa)
DMT superfamily drug/metabolite permease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AMV0_IGNAJ
DMT superfamily drug/metabolite permease Tax=RBG_16_Deltaproteobacteria_54_11_curated
protein of unknown function DUF6 transmembrane
Displaying 17 items

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