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13_1_20cm_full_scaffold_1345

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1345_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..183)
DNA (183bp) protein (61aa)
aminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI000346541A
Aminopeptidase {ECO:0000313|EMBL:KEO92823.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis
L-aminopeptidase DmpA
13_1_20cm_full_scaffold_1345_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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273..1331
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000367A76E
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABF42008.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_20cm_full_scaffold_1345_3
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1371..2399)
DNA (1029bp) protein (343aa)
Threonine aldolase {ECO:0000313|EMBL:AEI49051.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AEI49051.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="
Threonine aldolase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGE8_RUNSL
threonine aldolase
13_1_20cm_full_scaffold_1345_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2412..3278)
DNA (867bp) protein (289aa)
Probable gluconolactonase n=1 Tax=Rhizobium loti RepID=M5AMM6_RHILI
Probable gluconolactonase {ECO:0000313|EMBL:BAN10133.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mes
SMP-30/gluconolaconase/LRE-like region-containing protein
13_1_20cm_full_scaffold_1345_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3395..4033)
DNA (639bp) protein (213aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CL94_MYXFH
alpha-ketoglutarate-dependent dioxygenase AlkB
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:AEI65219.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoco
13_1_20cm_full_scaffold_1345_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4046..4678)
DNA (633bp) protein (211aa)
prolyl 4-hydroxylase n=1 Tax=Sphingomonas wittichii RepID=UPI0002DDED60
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ66918.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
13_1_20cm_full_scaffold_1345_7
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4807..5583)
DNA (777bp) protein (259aa)
methylated DNA-protein cysteine methyltransferase (EC:2.1.1.63)
Methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:AJQ96593.1}; EC=2.1.1.63 {ECO:0000313|EMBL:AJQ96593.1};; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ocean
O6-methylguanine-DNA methyltransferase n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MHI4_BORPB
13_1_20cm_full_scaffold_1345_8
unknown

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5773..6183
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_full_scaffold_1345_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6313..7734
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003727A87 rbh
putative outer membrane cation efflux protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
Heavy metal RND efflux outer membrane protein
13_1_20cm_full_scaffold_1345_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7731..8999
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C61D2 rbh
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
secretion protein HlyD
13_1_20cm_full_scaffold_1345_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8996..10264
DNA (1269bp) protein (423aa)
Heavy metal efflux pump CzcA n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126Z3_POLSJ
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
heavy metal efflux pump CzcA
13_1_20cm_full_scaffold_1345_12
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10234..12108
DNA (1875bp) protein (625aa)
cation transporter n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035DFADA
czcA; Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:AIY39465.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalob
13_1_20cm_full_scaffold_1345_13
unknown

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comp(12274..12684)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_full_scaffold_1345_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12797..13171)
DNA (375bp) protein (125aa)
DNA-binding transcriptional activator GcvA n=1 Tax=Oceanibaculum indicum P24 RepID=K2JRN5_9PROT
DNA-binding transcriptional activator GcvA {ECO:0000313|EMBL:EKE78093.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" so
gcvA; Glycine cleavage system transcriptional activator
Displaying 14 items

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