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13_1_20cm_full_scaffold_1389

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1389_1
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(180..452)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T8H1_BURPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD20535.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source=
13_1_20cm_full_scaffold_1389_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(671..1804)
DNA (1134bp) protein (378aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_16_Armatimonadetes_67_12_curated
tRNA-splicing ligase RtcB n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RTCB_PYRAB
hypothetical protein
13_1_20cm_full_scaffold_1389_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2210..2467)
DNA (258bp) protein (86aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VXI7_DESAO
nitrogen-fixing NifU domain-containing protein Tax=RBG_16_Armatimonadetes_67_12_curated
nitrogen-fixing NifU domain-containing protein
13_1_20cm_full_scaffold_1389_4
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2478..2867)
DNA (390bp) protein (130aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMQ2_THEM7
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein Tax=RBG_16_Armatimonadetes_67_12_curated
iron-sulfur cluster assembly accessory protein
13_1_20cm_full_scaffold_1389_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2927..3529)
DNA (603bp) protein (201aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGA3_THEM7
cupin Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
cupin
13_1_20cm_full_scaffold_1389_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3526..4560)
DNA (1035bp) protein (345aa)
sorbitol dehydrogenase (EC:1.1.1.14); K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
sorbitol dehydrogenase (EC:1.1.1.14)
Sorbitol dehydrogenase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKT8_THEYD rbh
13_1_20cm_full_scaffold_1389_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4551..5588)
DNA (1038bp) protein (346aa)
alcohol dehydrogenase GroES domain protein; K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Alcohol dehydrogenase GroES domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGA1_THEM7 rbh
alcohol dehydrogenase GroES domain protein
13_1_20cm_full_scaffold_1389_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5685..6875)
DNA (1191bp) protein (397aa)
MoaD family protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBW1_9FIRM rbh
MoaD family protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
MoaD family protein
13_1_20cm_full_scaffold_1389_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

7040..8065
DNA (1026bp) protein (342aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_16_Armatimonadetes_67_12_curated
Ferredoxin--NADP reductase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HNU2_9BACL rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_full_scaffold_1389_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8271..8681)
DNA (411bp) protein (137aa)
ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S10_SYMTH
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ABC transporter ATP-binding protein
13_1_20cm_full_scaffold_1389_11
unknown

Not on your lists

8741..9055
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_full_scaffold_1389_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8974..9459)
DNA (486bp) protein (162aa)
Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2G4_THERP
LuxR family transcriptional regulator Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
transcriptional regulatory protein degU
13_1_20cm_full_scaffold_1389_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9613..9843)
DNA (231bp) protein (77aa)
Putative transmembrane anti-sigma factor n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DG69_9GAMM
anti-sigma factor Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
putative transmembrane anti-sigma factor
13_1_20cm_full_scaffold_1389_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9840..10475)
DNA (636bp) protein (212aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG7_THET1
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_full_scaffold_1389_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(10619..11044)
DNA (426bp) protein (142aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Thermincola potens (strain JR) RepID=D5X843_THEPJ
AsnC family transcriptional regulator Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
AsnC family transcriptional regulator
13_1_20cm_full_scaffold_1389_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11041..11445)
DNA (405bp) protein (135aa)
Mov34/MPN/PAD-1 family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENI5_9CHLR
Mov34/MPN/PAD-1 family protein Tax=RBG_16_Armatimonadetes_67_12_curated
Mov34/MPN/PAD-1 family protein
13_1_20cm_full_scaffold_1389_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11640..12542)
DNA (903bp) protein (301aa)
cysteine synthase; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Cysteine synthase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBQ7_THET1
cysteine synthase
13_1_20cm_full_scaffold_1389_18
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12539..13396)
DNA (858bp) protein (286aa)
Hypothetical conserved protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SBH2_9CHLR alias=16ft_combo_ws3_scaffold_2801_9 id=5224711 tax=16ft_combo_ws3 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi
Siderophore staphylobactin biosynthesis protein SbnI Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_20cm_full_scaffold_1389_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(13519..15267)
DNA (1749bp) protein (583aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
Cystathionine beta-synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B771_HERA2 rbh
cystathionine beta-synthase
13_1_20cm_full_scaffold_1389_20
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(16480..17184)
DNA (705bp) protein (235aa)
Octanoyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDL3_THET1
lipoate-protein ligase B/lipoate synthase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
lipoate-protein ligase B
13_1_20cm_full_scaffold_1389_21
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(17305..18195)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I201_SULAT
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_20cm_full_scaffold_1389_22
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(18616..19401)
DNA (786bp) protein (262aa)
Iron permease FTR1 n=1 Tax=uncultured prokaryote RepID=H5SCN3_9ZZZZ
iron permease FTR1; K07243 high-affinity iron transporter Tax=CSP1_3_Armatimonadetes
iron permease FTR1
13_1_20cm_full_scaffold_1389_23
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(19493..20851)
DNA (1359bp) protein (453aa)
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Armatimonadetes_67_12_curated
Tryptophan synthase beta chain n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YEN1_DICT6 rbh
tryptophan synthase subunit beta rbh
13_1_20cm_full_scaffold_1389_24
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(20928..22634)
DNA (1707bp) protein (569aa)
ABC transporter, ATPase, predicted n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9E1_AMMDK rbh
ABC transporter ATPase Tax=CSP1_3_Armatimonadetes
ABC transporter ATPase
13_1_20cm_full_scaffold_1389_25
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(22655..23506)
DNA (852bp) protein (284aa)
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Firmicutes bacterium CAG:582 RepID=R6GU53_9FIRM
deoxyribonucleoside 5'-monophosphate N-glycosidase-like Tax=RBG_16_Armatimonadetes_67_12_curated
nucleoside 2-deoxyribosyltransferase
Displaying 25 items

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