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13_1_20cm_full_scaffold_13964

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_13964_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..322
DNA (321bp) protein (107aa)
atpF; ATP synthase subunit B, membrane-bound, F0 sector (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYC5_9PROT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
13_1_20cm_full_scaffold_13964_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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400..753
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSR3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH09662.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervica
13_1_20cm_full_scaffold_13964_3
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(819..1676)
DNA (858bp) protein (286aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9Z8_PARDP
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABL72342.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Par
13_1_20cm_full_scaffold_13964_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2467..3615)
DNA (1149bp) protein (383aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E4ED1F
DNA topoisomerase I {ECO:0000313|EMBL:KIF80175.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. T
13_1_20cm_full_scaffold_13964_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3796..4095
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N087_9GAMM
histone H1-like protein HC2
Histone H1-like protein HC2 {ECO:0000313|EMBL:BAQ18060.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepi
13_1_20cm_full_scaffold_13964_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4210..5133
DNA (924bp) protein (308aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured Chloroflexi bacterium HF0200_06I16 RepID=E0XTZ6_9CHLR
luciferase-like protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
luciferase-like protein
13_1_20cm_full_scaffold_13964_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5208..6158
DNA (951bp) protein (317aa)
amidohydrolase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037433F0
amidohydrolase 2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_full_scaffold_13964_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6273..7535
DNA (1263bp) protein (421aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative lipid-transfer protein n=1 Tax=uncultured bacterium 888 RepID=B8R8R6_9BACT rbh
thiolase
13_1_20cm_full_scaffold_13964_9

Not on your lists

7549..8070
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 888 RepID=B8R8R7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98073.1}; TaxID=548896 species="Bacteria; environmental samples.;" source="uncultured bacterium 888.;"
hypothetical protein
13_1_20cm_full_scaffold_13964_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8096..8953)
DNA (858bp) protein (286aa)
TonB-dependent receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MS9_RHOP5
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABJ06755.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
13_1_20cm_full_scaffold_13964_11
unknown

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10310..10540
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_full_scaffold_13964_12
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10587..11465)
DNA (879bp) protein (293aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WHA3_VEREI
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM57010.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
13_1_20cm_full_scaffold_13964_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11462..12376)
DNA (915bp) protein (305aa)
Permease component of ABC-type sugar transporter n=1 Tax=Polaromonas sp. CF318 RepID=J3D3R5_9BURK
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL84069.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
binding-protein-dependent transport system inner membrane protein
13_1_20cm_full_scaffold_13964_14
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(12386..13765)
DNA (1380bp) protein (460aa)
Extracellular solute-binding protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FVU4_9CYAN
Extracellular solute-binding protein {ECO:0000313|EMBL:CBN54484.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC
carbohydrate ABC transporter substrate-binding protein
13_1_20cm_full_scaffold_13964_15
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(13969..14535)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A5333
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIE12393.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB52
Displaying 15 items

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