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13_1_20cm_full_scaffold_14512

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_14512_1
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Clp protease proteolytic subunit ClpP n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F69D6
clpP; ATP-dependent Clp protease proteolytic subunit
13_1_20cm_full_scaffold_14512_2
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..756)
DNA (597bp) protein (199aa)
Trigger factor n=1 Tax=uncultured bacterium RepID=K2FGS9_9BACT
tig; trigger factor; K03545 trigger factor Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
tig; trigger factor
13_1_20cm_full_scaffold_14512_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(759..1418)
DNA (660bp) protein (220aa)
Trigger factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
tig; trigger factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
tig; trigger factor
13_1_20cm_full_scaffold_14512_trna_1
unknown

Not on your lists

comp(1440..1521)
DNA (82bp)
transferRNA
13_1_20cm_full_scaffold_14512_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1623..2435
DNA (813bp) protein (271aa)
Squalene synthase HpnC n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJT5_AZOSU rbh
erg9; squalene synthase hpnc Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
squalene synthase
13_1_20cm_full_scaffold_14512_5
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2432..3265
DNA (834bp) protein (278aa)
squalene synthase HpnD; K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
phytoene synthase n=1 Tax=Massilia niastensis RepID=UPI000375990C rbh
phytoene synthase
13_1_20cm_full_scaffold_14512_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3241..4539
DNA (1299bp) protein (433aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB9_9PROT rbh
squalene-associated FAD-dependent desaturase Tax=RBG_16_Betaproteobacteria_64_18_curated
squalene-associated FAD-dependent desaturase
13_1_20cm_full_scaffold_14512_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4712..5116)
DNA (405bp) protein (135aa)
GCN5-related N-acetyltransferase n=2 Tax=Cupriavidus RepID=Q1LAT3_RALME
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABF12743.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia
13_1_20cm_full_scaffold_14512_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5126..6007)
DNA (882bp) protein (294aa)
dyp; putative iron-dependent peroxidase (EC:1.11.1.7); K07223 putative iron-dependent peroxidase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa M8A.1 RepID=U8FSJ2_PSEAI rbh
peroxidase
13_1_20cm_full_scaffold_14512_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6032..6421)
DNA (390bp) protein (130aa)
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
DNA repair protein radA n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ZY5_CUPPJ
DNA repair protein RadA
13_1_20cm_full_scaffold_14512_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6620..6922
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_full_scaffold_14512_11
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..7319
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E2L0_9MICO
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
13_1_20cm_full_scaffold_14512_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..7824)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFP9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
hypothetical protein
13_1_20cm_full_scaffold_14512_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7921..8667)
DNA (747bp) protein (249aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACI1_9PROT
13_1_20cm_full_scaffold_14512_14
unknown

Not on your lists

comp(9418..9612)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_full_scaffold_14512_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9657..10328
DNA (672bp) protein (224aa)
Major Facilitator Superfamily transporter n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LNG1_9BURK
major facilitator superfamily permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
major facilitator superfamily permease
13_1_20cm_full_scaffold_14512_16
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10362..11366
DNA (1005bp) protein (335aa)
HtrA2 peptidase (EC:3.4.21.108) Tax=RBG_13_Deltaproteobacteria_52_11b_curated
HtrA2 peptidase (EC:3.4.21.108)
2-alkenal reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJY8_9BACT
Displaying 17 items

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