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13_1_20cm_full_scaffold_16215

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_16215_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..1485
DNA (1485bp) protein (495aa)
Chromosome partition protein Smc n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYU0_9FIRM
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=GWA2_Rokubacteria_73_35_curated
smc; chromosome segregation protein SMC
13_1_20cm_full_scaffold_16215_2
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1500..2447
DNA (948bp) protein (316aa)
Signal recognition particle receptor FtsY n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XPR8_DESHA
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiale
hypothetical protein
13_1_20cm_full_scaffold_16215_3
unknown

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2444..2722
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_full_scaffold_16215_4
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2764..3075
DNA (312bp) protein (104aa)
UPF0122 protein Slip_0905 n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLV0_SYNLT
helix-turn-helix protein YlxM/p13 family protein
UPF0122 protein Slip_0905 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus li
13_1_20cm_full_scaffold_16215_5
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3068..4405
DNA (1338bp) protein (446aa)
Signal recognition particle protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AC68_CARHZ
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobactera
13_1_20cm_full_scaffold_16215_6
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4418..4993
DNA (576bp) protein (192aa)
30S ribosomal protein S16 n=1 Tax=Fructobacillus fructosus RepID=UPI0002195A02
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1430331 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. G1w1.;"
30S ribosomal protein S16
13_1_20cm_full_scaffold_16215_7

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4990..5496
DNA (507bp) protein (169aa)
Ribosome maturation factor RimM n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=RIMM_DEHE1
Marine sediment metagenome DNA, contig: S06H3_S09269 {ECO:0000313|EMBL:GAI40817.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ribosome maturation protein RimM
13_1_20cm_full_scaffold_16215_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

5493..6170
DNA (678bp) protein (226aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_16_Chloroflexi_50_9_curated
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Dehalococcoides mccartyi RepID=D2BGJ1_DEHSV
trmD; tRNA (guanine-N1)-methyltransferase
13_1_20cm_full_scaffold_16215_9
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6188..6622
DNA (435bp) protein (145aa)
50S ribosomal protein L19 n=2 Tax=Megasphaera RepID=S7HJ43_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;"
50S ribosomal protein L19
13_1_20cm_full_scaffold_16215_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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6720..7268
DNA (549bp) protein (183aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002F2BBA5
13_1_20cm_full_scaffold_16215_11
CG_Nitrosp_01, Nitrospirae, Bacteria

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7243..7596
DNA (354bp) protein (118aa)
UPF0102 protein Desku_2123 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNH1_DESK7
hypothetical protein; K07460 putative endonuclease Tax=CG_Nitrosp_01
hypothetical protein
13_1_20cm_full_scaffold_16215_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7686..8435)
DNA (750bp) protein (250aa)
glutamine-fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine-fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ABG03116.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ABG03116.1};; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria;
Glutamine-fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR2_RUBXD
13_1_20cm_full_scaffold_16215_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8563..9183)
DNA (621bp) protein (207aa)
Coenzyme A pyrophosphatase n=2 Tax=Geobacter sulfurreducens RepID=D7AG86_GEOSK
coenzyme A pyrophosphatase Tax=GWC2_Rokubacteria_70_16_curated
coenzyme A pyrophosphatase
13_1_20cm_full_scaffold_16215_14
unknown

Not on your lists

comp(9174..9359)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_full_scaffold_16215_15
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(9328..9804)
DNA (477bp) protein (159aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE23_THET1
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ACZ41179.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying 15 items

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