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13_1_20cm_full_scaffold_16445

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_16445_1

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3..407
DNA (405bp) protein (135aa)
Pyruvate kinase II n=2 Tax=mine drainage metagenome RepID=T0ZU84_9ZZZZ
Pyruvate kinase II {ECO:0000313|EMBL:EQD51856.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pyruvate kinase
13_1_20cm_full_scaffold_16445_2
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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515..2785
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B93DE
penicilin amidase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
penicilin amidase
13_1_20cm_full_scaffold_16445_3

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2945..3247
DNA (303bp) protein (101aa)
Phospholipase, patatin family (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A4G2_9ZZZZ
Phospholipase, patatin family {ECO:0000313|EMBL:EQD51857.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_full_scaffold_16445_4

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3247..4119
DNA (873bp) protein (291aa)
Phospholipase, patatin family (Fragment) n=1 Tax=mine drainage metagenome RepID=T1APP5_9ZZZZ rbh
Phospholipase, patatin family {ECO:0000313|EMBL:EQD42684.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Patatin
13_1_20cm_full_scaffold_16445_5
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4150..4434)
DNA (285bp) protein (95aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Teredinibacter turnerae RepID=UPI00036B19A2
hypothetical protein
Nucleotide-binding protein TERTU_3824 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Te
13_1_20cm_full_scaffold_16445_6
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4431..5003)
DNA (573bp) protein (191aa)
UPF0042 nucleotide-binding protein Rifp1Sym_ap00260 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DB96_9GAMM
Nucleotide-binding protein TevJSym_ak00770 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont o
hypothetical protein
13_1_20cm_full_scaffold_16445_7

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comp(5365..6798)
DNA (1434bp) protein (478aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase factor sigma-54 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B4I9_9ZZZZ rbh
RNA polymerase factor sigma-54 {ECO:0000313|EMBL:EQD47724.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_full_scaffold_16445_8
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6889..7569)
DNA (681bp) protein (227aa)
ABC transporter ATP-binding protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1L7L0_9GAMM
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIY64060.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromona
13_1_20cm_full_scaffold_16445_9

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comp(7566..8318)
DNA (753bp) protein (251aa)
Lipopolysaccharide transport periplasmic protein LptA (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZI28_9ZZZZ
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EQD44067.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
lipopolysaccharide transport periplasmic protein LptA
13_1_20cm_full_scaffold_16445_10
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8299..8859)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E243_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH68862.1}; Flags: Precursor;; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" sour
13_1_20cm_full_scaffold_16445_11
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8859..9347)
DNA (489bp) protein (163aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=RBG_13_Deltaproteobacteria_60_28
3-deoxy-manno-octulosonate-8-phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=2 Tax=Coxiella burnetii RepID=A9NDF0_COXBR
13_1_20cm_full_scaffold_16445_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9368..10390)
DNA (1023bp) protein (341aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=314278 species="Bacteria; Proteobacteri
Arabinose 5-phosphate isomerase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQL6_9GAMM rbh
D-arabinose 5-phosphate isomerase
13_1_20cm_full_scaffold_16445_13
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10636..11010
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI0003765098
PilT domain-containing protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
PilT domain-containing protein
13_1_20cm_full_scaffold_16445_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11040..11276
DNA (237bp) protein (79aa)
BolA-like protein 1 n=3 Tax=Xanthomonas campestris pv. translucens RepID=L0T0T1_XANCT
BolA family transcriptional regulator {ECO:0000313|EMBL:EYR69907.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
BolA family transcriptional regulator
13_1_20cm_full_scaffold_16445_15
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11392..12651
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0P6_9GAMM rbh
13_1_20cm_full_scaffold_16445_16

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12758..13051
DNA (294bp) protein (98aa)
6-phosphogluconate dehydrogenase (Decarboxylating) n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AR86_PELPD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49097.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
6-phosphogluconate dehydrogenase
Displaying 16 items

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