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13_1_20cm_full_scaffold_18534

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_18534_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(3..155)
DNA (153bp) protein (51aa)
50S ribosomal protein L7/L12 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLY6_SORCE
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rplL; 50S ribosomal protein L7/L12
13_1_20cm_full_scaffold_18534_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(309..482)
DNA (174bp) protein (58aa)
50S ribosomal protein L10 n=1 Tax=Aquifex pyrophilus RepID=RL10_AQUPY
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
13_1_20cm_full_scaffold_18534_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(836..1543)
DNA (708bp) protein (236aa)
50S ribosomal protein L1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL1_KORVE
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rplA; 50S ribosomal protein L1
13_1_20cm_full_scaffold_18534_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(1744..2169)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000368C302
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
50S ribosomal protein L11
13_1_20cm_full_scaffold_18534_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2232..2774)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHG9_KORVE
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
transcription antitermination protein nusG
13_1_20cm_full_scaffold_18534_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2824..3000)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036A8B4C
preprotein translocase, SecE subunit; K03073 preprotein translocase subunit SecE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_full_scaffold_18534_trna_5
unknown

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comp(3132..3204)
DNA (73bp)
transferRNA
13_1_20cm_full_scaffold_18534_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(3243..3392)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7S1_GEOLS
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
rpmG; 50S ribosomal protein L33
13_1_20cm_full_scaffold_18534_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3505..4704)
DNA (1200bp) protein (400aa)
elongation factor Tu n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B16A
tufB; elongation factor Tu Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
tuf; elongation factor Tu
13_1_20cm_full_scaffold_18534_trna_4
unknown

Not on your lists

comp(4845..4917)
DNA (73bp)
transferRNA
13_1_20cm_full_scaffold_18534_trna_3
unknown

Not on your lists

comp(5042..5113)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_18534_trna_2
unknown

Not on your lists

comp(5287..5370)
DNA (84bp)
transferRNA
13_1_20cm_full_scaffold_18534_trna_1
unknown

Not on your lists

comp(5431..5503)
DNA (73bp)
transferRNA
13_1_20cm_full_scaffold_18534_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5614..5922)
DNA (309bp) protein (103aa)
RNA methyltransferase TrmH, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Thioalkalivibrio RepID=UPI00035C82E8
RNA methyltransferase
13_1_20cm_full_scaffold_18534_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6311..7153)
DNA (843bp) protein (281aa)
BclB C-terminal domain protein n=1 Tax=Clostridium difficile CD49 RepID=T2Z2Y8_CLODI
Flagellar hook-length control protein FliK Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
BclB C-terminal domain-containing protein
13_1_20cm_full_scaffold_18534_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7254..7841)
DNA (588bp) protein (196aa)
glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gltX2; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3W8_ACIC5
13_1_20cm_full_scaffold_18534_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7850..8743)
DNA (894bp) protein (298aa)
gltX2; glutamate--tRNA ligase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037F3E28
13_1_20cm_full_scaffold_18534_13
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(8733..8918)
DNA (186bp) protein (62aa)
IspF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_16_Chloroflexi_64_32_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sutterella sp. CAG:521 RepID=R7KJ52_9BURK
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Displaying 18 items

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