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13_1_20cm_full_scaffold_1872

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1872_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Thiamine-monophosphate kinase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S7Q6_MICSL
thiamine-monophosphate kinase
13_1_20cm_full_scaffold_1872_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(405..1928)
DNA (1524bp) protein (508aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEM1_ANASK
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_1_20cm_full_scaffold_1872_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1925..2740)
DNA (816bp) protein (272aa)
MEMO1 family protein A2cp1_1355 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JGM8_ANAD2
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_1872_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2752..2949)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium HF0130_06E03 RepID=E0XSX5_9BACT alias=16ft_combo_ws3_scaffold_775_64 id=5225635 tax=16ft_combo_ws3 species=uncultured bacterium HF0130_06E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_1872_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2981..3367)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_1_20cm_full_scaffold_1872_6
bacterium UASB270, Bacteria

Not on your lists

comp(3364..5040)
DNA (1677bp) protein (559aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI00037A8F21
13_1_20cm_full_scaffold_1872_7
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(5047..5748)
DNA (702bp) protein (234aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_13_Actinobacteria_55_18_curated
ATP-dependent protease La Type I (EC:3.4.21.53)
Lon protease alias=gwe2_scaffold_111_117 id=1761016 tax=TA06 species=Dictyoglomus genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi
13_1_20cm_full_scaffold_1872_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(5749..6099)
DNA (351bp) protein (117aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI33_RHOMR
heat shock protein Hsp20 family protein Tax=RBG_13_Chloroflexi_66_10_curated
heat shock protein Hsp20
13_1_20cm_full_scaffold_1872_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6160..7440)
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=GLYA_ANASK
13_1_20cm_full_scaffold_1872_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7437..7829)
DNA (393bp) protein (131aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
ribose 5-phosphate isomerase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B49713
13_1_20cm_full_scaffold_1872_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7910..9055)
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_full_scaffold_1872_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9039..9887)
DNA (849bp) protein (283aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG94_RHOM4 rbh
3-hydroxybutyryl-CoA dehydrogenase
13_1_20cm_full_scaffold_1872_13
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9884..10753)
DNA (870bp) protein (290aa)
Abortive infection protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6K5_TERSS
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADV82744.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
13_1_20cm_full_scaffold_1872_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10750..11328)
DNA (579bp) protein (193aa)
BioY protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U5C7_OCEP5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bioy protein
13_1_20cm_full_scaffold_1872_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11328..12521)
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X1_GEMAT
13_1_20cm_full_scaffold_1872_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12609..14519)
DNA (1911bp) protein (637aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
13_1_20cm_full_scaffold_1872_17
unknown

Not on your lists

comp(14524..14685)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_full_scaffold_1872_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


14762..17482
DNA (2721bp) protein (907aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT
Valyl-tRNA synthetase
13_1_20cm_full_scaffold_1872_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17425..18768
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_1872_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18765..20120
DNA (1356bp) protein (452aa)
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L70_SYMTH
13_1_20cm_full_scaffold_1872_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20113..20679
DNA (567bp) protein (189aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YHY3_9DELT
histidinol-phosphate phosphatase family protein
13_1_20cm_full_scaffold_1872_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20700..21167
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034CE977
peptidase C14 caspase catalytic subunit P20 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_20cm_full_scaffold_1872_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21164..21814
DNA (651bp) protein (217aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
13_1_20cm_full_scaffold_1872_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21804..22736
DNA (933bp) protein (311aa)
Peptidase M42 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B8T1_9ZZZZ
Putative M42 glutamyl aminopeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase family protein
Displaying 24 items

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