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13_1_20cm_full_scaffold_21812

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_21812_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3..401)
DNA (399bp) protein (133aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA28E
13_1_20cm_full_scaffold_21812_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(402..785)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T6A1_9EURY
rps11p; 30S ribosomal protein S11P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps11p; 30S ribosomal protein S11P
13_1_20cm_full_scaffold_21812_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(788..1420)
DNA (633bp) protein (211aa)
30S ribosomal protein S4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9R9_9EURY
rps4p; 30S ribosomal protein S4P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps4p; 30S ribosomal protein S4P
13_1_20cm_full_scaffold_21812_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(1425..2057)
DNA (633bp) protein (211aa)
30S ribosomal protein S13 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DF005
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Euryarchaeota_67_27_curated
rps13p; 30S ribosomal protein S13
13_1_20cm_full_scaffold_21812_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(2169..3194)
DNA (1026bp) protein (342aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Euryarchaeota_68_13_curated
dTDP-glucose 4,6-dehydratase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3G8_9BACT
dTDP-glucose 4,6-dehydratase
13_1_20cm_full_scaffold_21812_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3201..3662)
DNA (462bp) protein (154aa)
Spore coat polysaccharide biosynthesis protein spsL n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML12_9BACT
spsL; Spore coat polysaccharide biosynthesis protein spsL Tax=RBG_16_Euryarchaeota_67_27_curated
spsL; Spore coat polysaccharide biosynthesis protein spsL
13_1_20cm_full_scaffold_21812_7
unknown

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comp(3899..4075)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_full_scaffold_21812_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4098..4580
DNA (483bp) protein (161aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT26_9EURY
13_1_20cm_full_scaffold_21812_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4872..5594
DNA (723bp) protein (241aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Euryarchaeota_67_27_curated
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_20cm_full_scaffold_21812_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(5640..6245)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JT6_SYMTH
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_full_scaffold_21812_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6285..7691)
DNA (1407bp) protein (469aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_21812_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7746..8579
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B9578
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase
13_1_20cm_full_scaffold_21812_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8610..9266
DNA (657bp) protein (219aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41); K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=RBG_16_Euryarchaeota_67_27_curated
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9F2_ACIB4
13_1_20cm_full_scaffold_21812_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9343..11046
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W080_UNCMA
hypothetical protein; K08979 putative membrane protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_full_scaffold_21812_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11043..11636)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000377EE64
glutamine amidotransferase subunit PdxT Tax=RBG_16_Euryarchaeota_67_27_curated
glutamine amidotransferase subunit PdxT
13_1_20cm_full_scaffold_21812_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(11711..12184)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B660_METTP
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_full_scaffold_21812_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12187..12531
DNA (345bp) protein (115aa)
Transcriptional regulator, AsnC family n=1 Tax=mine drainage metagenome RepID=T0YGZ7_9ZZZZ
transcriptional regulator, AsnC family Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
AsnC family transcriptional regulator
13_1_20cm_full_scaffold_21812_18
unknown

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comp(12585..12896)
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying 18 items

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