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13_1_20cm_full_scaffold_223

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_223_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1029
DNA (1029bp) protein (343aa)
UPI0003CE77E5 related cluster n=1 Tax=unknown RepID=UPI0003CE77E5
FAD-linked oxidase {ECO:0000313|EMBL:ESW92480.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC
FAD/FMN-containing dehydrogenase
13_1_20cm_full_scaffold_223_2
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1162..2310
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D9C95
RfaG, Glycosyltransferase {ECO:0000313|EMBL:KFZ90439.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
group 1 glycosyl transferase
13_1_20cm_full_scaffold_223_3
unknown

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comp(2399..2791)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_20cm_full_scaffold_223_4
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2795..3271)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZH92_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD60810.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
OsmC-like protein
13_1_20cm_full_scaffold_223_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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3329..4714
DNA (1386bp) protein (462aa)
Amino acid transporter n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHF3_CHLTF
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AEP12216.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strai
13_1_20cm_full_scaffold_223_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4735..5382)
DNA (648bp) protein (216aa)
Methyltransferase type 12 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB78_ANASK
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACG71726.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_20cm_full_scaffold_223_7
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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5635..6231
DNA (597bp) protein (199aa)
PEBP family protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BF49_MEISD
PEBP family protein
PEBP family protein {ECO:0000313|EMBL:ADH63402.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanu
13_1_20cm_full_scaffold_223_8

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6517..7803
DNA (1287bp) protein (429aa)
Ribosomal protein S12 methylthiotransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AEZ7_9ZZZZ rbh
Ribosomal protein S12 methylthiotransferase {ECO:0000313|EMBL:EQD55732.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
MiaB-like tRNA modifying enzyme YliG
13_1_20cm_full_scaffold_223_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7837..8436)
DNA (600bp) protein (200aa)
Putative peptidoglycan binding protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTH8_SYNAS
peptidoglycan binding protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
peptidoglycan binding protein
13_1_20cm_full_scaffold_223_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8565..10187)
DNA (1623bp) protein (541aa)
Sulfate permease family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCJ6_9GAMM rbh
Sulfate permease family protein {ECO:0000313|EMBL:EIL97187.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodano
membrane protein
13_1_20cm_full_scaffold_223_11
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(10184..11536)
DNA (1353bp) protein (451aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
HipA domain protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0G1_9BACT rbh
toxin HipA
13_1_20cm_full_scaffold_223_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11540..11902)
DNA (363bp) protein (121aa)
Helix-turn-helix domain protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BIN0_CHLPD
XRE family transcriptional regulator Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
helix-turn-helix domain-containing protein
13_1_20cm_full_scaffold_223_13

Not on your lists

comp(12107..12772)
DNA (666bp) protein (222aa)
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=mine drainage metagenome PF3_9ZZZZ">RepID=T1CPF3_9ZZZZ
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing {ECO:0000313|EMBL:EQD70930.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainag
glucosamine 6-phosphate synthase
13_1_20cm_full_scaffold_223_14
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12972..13649
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI000314DD72
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA27538.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloro
13_1_20cm_full_scaffold_223_15
unknown

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13659..13964
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_full_scaffold_223_16
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..15458)
DNA (1380bp) protein (460aa)
Bifunctional protein GlmU n=1 Tax=Thauera sp. 63 RepID=N6YBG1_9RHOO
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;
UDP-N-acetylglucosamine pyrophosphorylase
13_1_20cm_full_scaffold_223_17
RLO_Gammaproteobacteria_52_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15607..16824)
DNA (1218bp) protein (406aa)
Peptidase C13 family n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B72B47
peptidase C13, legumain asparaginyl peptidase Tax=RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated
peptidase
13_1_20cm_full_scaffold_223_18

Not on your lists

comp(17008..17436)
DNA (429bp) protein (143aa)
ATPase, F1 complex, delta/epsilon subunit {ECO:0000313|EMBL:EQD71121.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EQD71121.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;
ATPase, F1 complex, delta/epsilon subunit n=1 Tax=mine drainage metagenome RepID=T1BE04_9ZZZZ
ATP synthase F1 subunit epsilon
13_1_20cm_full_scaffold_223_19

Not on your lists

comp(17464..17550)
DNA (87bp) protein (29aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
F0F1 ATP synthase subunit beta (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CPY2_9ZZZZ
F0F1 ATP synthase subunit beta {ECO:0000313|EMBL:EQD71120.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 19 items

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