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13_1_20cm_full_scaffold_2508

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2508_1
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

127..495
DNA (369bp) protein (123aa)
integrase n=1 Tax=pseudomallei group RepID=UPI00016A2CD9
integrase Tax=RBG_16_RIF03_38_11_curated
integrase
13_1_20cm_full_scaffold_2508_trna_1
unknown

Not on your lists

comp(525..608)
DNA (84bp)
transferRNA
13_1_20cm_full_scaffold_2508_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

646..3054
DNA (2409bp) protein (803aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4ME79_9ACTO
peptidase S8 family protein Tax=RBG_16_Actinobacteria_68_12_curated
subtilisin-like protease
13_1_20cm_full_scaffold_2508_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3051..3296)
DNA (246bp) protein (82aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_full_scaffold_2508_4
unknown

Not on your lists

3365..3529
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_full_scaffold_2508_5
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3619..4017)
DNA (399bp) protein (133aa)
plasmid stabilization protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037BBED5
hypothetical protein
Plasmid stabilization protein {ECO:0000313|EMBL:KJY46167.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;
13_1_20cm_full_scaffold_2508_6
unknown

Not on your lists

comp(4045..4431)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_full_scaffold_2508_7
unknown

Not on your lists

comp(4449..4718)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_full_scaffold_2508_8
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4783..5142)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000374C92E
gas vesicle protein K Tax=RBG_13_Chloroflexi_56_8_curated
gas vesicle protein K
13_1_20cm_full_scaffold_2508_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(5126..5797)
DNA (672bp) protein (224aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C249_SPHTD
gas vesicle synthesis protein GvpLGvpF
Gas vesicle synthesis GvpLGvpF {ECO:0000313|EMBL:ACZ38316.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;
13_1_20cm_full_scaffold_2508_10
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5794..6012)
DNA (219bp) protein (73aa)
gas vesicle protein GvpA n=1 Tax=Polaribacter franzmannii RepID=UPI000362FC05
Uncharacterized protein {ECO:0000313|EMBL:EAR13311.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
gas vesicle protein GvpA
13_1_20cm_full_scaffold_2508_11
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6009..6854)
DNA (846bp) protein (282aa)
Gas vesicle synthesis GvpLGvpF n=1 Tax=Rhodococcus sp. EsD8 RepID=N1LZT9_9NOCA
Gas vesicle synthesis protein {ECO:0000313|EMBL:CDZ89839.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein
13_1_20cm_full_scaffold_2508_12
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6851..7171)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035E8658
gvpJ1; gas vesicle synthesis protein
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (s
13_1_20cm_full_scaffold_2508_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7168..8073)
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4F8C8_SACEN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQD85351.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea
13_1_20cm_full_scaffold_2508_14
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8073..8861)
DNA (789bp) protein (263aa)
Gas vesicle synthesis protein GvpL/GvpF n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J2F1_MYCSM
Gas vesicle synthesis protein GvpL/GvpF
Gas vesicle synthesis protein GvpL/GvpF {ECO:0000313|EMBL:AGB25750.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegm
13_1_20cm_full_scaffold_2508_15
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8865..9194)
DNA (330bp) protein (110aa)
gas vesicle protein n=1 Tax=Yaniella halotolerans RepID=UPI0003B2E3C2
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=1566387 species="Bacteria; Proteobacteria; Alphapro
gas vesicle protein
13_1_20cm_full_scaffold_2508_16
unknown

Not on your lists

comp(9203..9664)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_full_scaffold_2508_17
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9668..9982)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003788633
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=359131 species="Bacteria; Actinobacteria; Streptomy
gas vesicle protein
Displaying 18 items

View Taxonomy