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13_1_20cm_full_scaffold_2546

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2546_1
unknown

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comp(3..95)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_full_scaffold_2546_2
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(260..709)
DNA (450bp) protein (150aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRW1_9CYAN
methionine-R-sulfoxide reductase
13_1_20cm_full_scaffold_2546_3
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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869..1393
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C73D4
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_20cm_full_scaffold_2546_4
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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1685..2845
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C73D4
Band 7 protein Tax=RBG_16_Chloroflexi_57_8_curated
hypothetical protein
13_1_20cm_full_scaffold_2546_5
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2954..3439
DNA (486bp) protein (162aa)
Ferritin Dps family protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KK42_CYAP7
DNA starvation/stationary phase protection protein Dps
Ferritin Dps family protein {ECO:0000313|EMBL:ACK70927.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (S
13_1_20cm_full_scaffold_2546_6

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comp(3512..4276)
DNA (765bp) protein (255aa)
Pirin-like protein n=1 Tax=mine drainage metagenome RepID=T0ZEM2_9ZZZZ
Pirin-like protein {ECO:0000313|EMBL:EQD43533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pirin
13_1_20cm_full_scaffold_2546_7
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

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4493..5326
DNA (834bp) protein (278aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTX0_METMJ rbh
alpha/beta hydrolase fold protein Tax=GWF2_Elusimicrobia_62_30_curated
alpha/beta hydrolase
13_1_20cm_full_scaffold_2546_8
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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5392..5775
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH49_METPE
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_20cm_full_scaffold_2546_9
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5830..7563)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003659204
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ADI10632.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggen
13_1_20cm_full_scaffold_2546_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7707..8051
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_full_scaffold_2546_trna_1
unknown

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comp(8290..8363)
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_2546_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8421..8606)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T568_9EURY
SSU ribosomal protein S27Ae Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
30S ribosomal protein S27ae
13_1_20cm_full_scaffold_2546_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8606..9172)
DNA (567bp) protein (189aa)
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7UA95_9EURY
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Euryarchaeota_67_27_curated
ribosomal protein S24e
13_1_20cm_full_scaffold_2546_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9176..9721)
DNA (546bp) protein (182aa)
UPF0218 protein MBGDF03_00759 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U0Y0_9EURY
hypothetical protein; K09735 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_full_scaffold_2546_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9687..9878)
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D5438
13_1_20cm_full_scaffold_2546_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(9883..10413)
DNA (531bp) protein (177aa)
DNA-directed RNA polymerase subunit E (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=2 Tax=Methanomassiliicoccus RepID=U5Q1X5_9EURY
Displaying 16 items

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