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13_1_20cm_full_scaffold_28092

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_28092_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3..170)
DNA (168bp) protein (56aa)
Elongation factor Tu n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR2_9BACT
tuf; elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
translation elongation factor Tu
13_1_20cm_full_scaffold_28092_trna_4
unknown

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comp(214..286)
DNA (73bp)
transferRNA
13_1_20cm_full_scaffold_28092_trna_3
unknown

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comp(380..451)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_28092_trna_2
unknown

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comp(482..564)
DNA (83bp)
transferRNA
13_1_20cm_full_scaffold_28092_trna_1
unknown

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comp(620..691)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_28092_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(709..1527)
DNA (819bp) protein (273aa)
rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ96_HALO1
TrmH family RNA methyltransferase
13_1_20cm_full_scaffold_28092_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1476..2405)
DNA (930bp) protein (310aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cysteine--tRNA ligase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=SYC_PELPD
cysS; cysteinyl-tRNA synthetase
13_1_20cm_full_scaffold_28092_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2446..2826)
DNA (381bp) protein (127aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=GWA2_Rokubacteria_70_23_curated
Cysteine--tRNA ligase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=SYC_SYNFM
cysteinyl-tRNA synthetase
13_1_20cm_full_scaffold_28092_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2823..3299)
DNA (477bp) protein (159aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIU2_DESAR
13_1_20cm_full_scaffold_28092_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3296..3748)
DNA (453bp) protein (151aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Paenibacillus sp. P22 RepID=T2LQN3_9BACL
13_1_20cm_full_scaffold_28092_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3929..4939)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK12_9BACT
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_full_scaffold_28092_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4936..6300)
DNA (1365bp) protein (455aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1N6_GEOLS rbh
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_full_scaffold_28092_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6341..7087)
DNA (747bp) protein (249aa)
Mce family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 13 items

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