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13_1_20cm_full_scaffold_28335

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_28335_1
unknown

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1..255
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_full_scaffold_28335_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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255..680
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKH5_9BACT
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus M
13_1_20cm_full_scaffold_28335_3
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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677..1003
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI0003778700
50S ribosomal protein L29 {ECO:0000313|EMBL:AKG43463.1}; TaxID=408015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
rpmC; 50S ribosomal protein L29
13_1_20cm_full_scaffold_28335_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1000..1287
DNA (288bp) protein (96aa)
30S ribosomal protein S17 n=1 Tax=Varibaculum cambriense RepID=UPI0003B7A9FC
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="V
rpsQ; 30S ribosomal protein S17
13_1_20cm_full_scaffold_28335_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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1294..1662
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA93_THEPJ
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source
13_1_20cm_full_scaffold_28335_6
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1669..2055
DNA (387bp) protein (129aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carbox
13_1_20cm_full_scaffold_28335_7
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2059..2673
DNA (615bp) protein (205aa)
50S ribosomal protein L5 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS58_KYRT2
50S ribosomal protein L5
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_full_scaffold_28335_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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2827..3279
DNA (453bp) protein (151aa)
30S ribosomal protein S8 n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IUA6_9FIRM
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_RIF_CHLX_69_14_curated
rpsH; 30S ribosomal protein S8
13_1_20cm_full_scaffold_28335_9
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3294..3848
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E8H6_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
50S ribosomal protein L6
13_1_20cm_full_scaffold_28335_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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3845..4198
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA99_THEPJ
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR
13_1_20cm_full_scaffold_28335_11

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4198..4614
DNA (417bp) protein (139aa)
Ribosomal protein S5, bacterial-type (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BAR9_9ZZZZ
Ribosomal protein S5, bacterial-type {ECO:0000313|EMBL:EQD50089.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagen
30S ribosomal protein S5
13_1_20cm_full_scaffold_28335_12
unknown

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4581..4742
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_full_scaffold_28335_13
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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4735..4995
DNA (261bp) protein (87aa)
50S ribosomal protein L30 n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IZG1_BUTFI
LSU ribosomal protein L30P
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" sour
13_1_20cm_full_scaffold_28335_14
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4998..5588
DNA (591bp) protein (197aa)
50S ribosomal protein L15 n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TT91_BACCJ
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=98228 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp
13_1_20cm_full_scaffold_28335_15
GWA1_OP11_48_10_plus, Microgenomates, Bacteria

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5592..5879
DNA (288bp) protein (96aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKU90669.1}; TaxID=1618496 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_48_10.;"
preprotein translocase subunit SecY
tmt:Tmath_1914 preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY alias=ACD50_26819.5128.8G0011,ACD50_26819.5128.8_11,ACD50_C00196G00011 id=72859 tax=ACD50 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
Displaying 15 items

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