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13_1_20cm_full_scaffold_3026

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3026_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..358)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E3D2A4
signal peptide protein
Signal peptide protein {ECO:0000313|EMBL:AHX13839.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
13_1_20cm_full_scaffold_3026_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(407..1324)
DNA (918bp) protein (306aa)
PfkB domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYF3_9BACT rbh
PfkB domain protein {ECO:0000313|EMBL:EDY20494.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ydjH; PfkB family kinase
13_1_20cm_full_scaffold_3026_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1496..2149)
DNA (654bp) protein (218aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD8_9BACT
thiE; thiamine monophosphate synthase
13_1_20cm_full_scaffold_3026_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2151..2981)
DNA (831bp) protein (277aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
acetyl-CoA carboxylase subunit alpha (EC:6.4.1.1)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D215_9BACT
13_1_20cm_full_scaffold_3026_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2930..3481)
DNA (552bp) protein (184aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D215_9BACT
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDY19777.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
accC; Biotin carboxylase
13_1_20cm_full_scaffold_3026_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3563..3775)
DNA (213bp) protein (71aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D216_9BACT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EDY19778.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
accB; Biotin carboxyl carrier protein
13_1_20cm_full_scaffold_3026_7
unknown

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4275..4415
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_full_scaffold_3026_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4409..5212
DNA (804bp) protein (268aa)
Pseudouridine synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D1_9BACT
Pseudouridine synthase {ECO:0000313|EMBL:EDY18336.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pseudouridine synthase
13_1_20cm_full_scaffold_3026_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5345..5962
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744486
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
13_1_20cm_full_scaffold_3026_10
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

Not on your lists

5980..6594
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXQ4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACO70877.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_3026_11
unknown

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comp(6636..7133)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_full_scaffold_3026_12
unknown

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comp(7375..7599)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_full_scaffold_3026_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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7829..9124
DNA (1296bp) protein (432aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ste24 endopeptidase (EC:3.4.24.84)
STE24 endopeptidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3S1_9PROT
13_1_20cm_full_scaffold_3026_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9211..9651)
DNA (441bp) protein (147aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ08_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_3026_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9692..10333)
DNA (642bp) protein (214aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
citrate synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745917
13_1_20cm_full_scaffold_3026_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10349..10915)
DNA (567bp) protein (189aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verruco
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XII4_9BACT
succinyl-CoA synthetase, alpha subunit
Displaying 16 items

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