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13_1_20cm_full_scaffold_3343

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3343_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..666)
DNA (666bp) protein (222aa)
putative rRNA methyltransferase (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sun protein n=1 Tax=Synechococcus elongatus (strain PCC 7942) RepID=Q31PM7_SYNE7
sun protein
13_1_20cm_full_scaffold_3343_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(833..1630)
DNA (798bp) protein (266aa)
Thiazole synthase n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9Z781_LEPFM
thiG; thiazole biosynthesis protein thiG Tax=RBG_16_Gemmatimonadetes_66_8_curated
thiG; thiazole biosynthesis protein thiG
13_1_20cm_full_scaffold_3343_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1635..1847)
DNA (213bp) protein (71aa)
Bifunctional sulfur carrier protein/thiazole synthase protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VLA9_9SPHN
thiamine biosynthesis protein ThiS Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bifunctional sulfur carrier protein/thiazole synthase
13_1_20cm_full_scaffold_3343_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1844..2461)
DNA (618bp) protein (206aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2E7_9FIRM
13_1_20cm_full_scaffold_3343_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2458..3435)
DNA (978bp) protein (326aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methionyl-tRNA formyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A606_GEMAT
Methionyl-tRNA formyltransferase
13_1_20cm_full_scaffold_3343_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3436..3984)
DNA (549bp) protein (183aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
def; peptide deformylase Def (EC:3.5.1.88)
peptide deformylase n=1 Tax=Rhizobium giardinii RepID=UPI00036085A2
13_1_20cm_full_scaffold_3343_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3981..4337)
DNA (357bp) protein (119aa)
preprotein translocase subunit YajC n=1 Tax=Ponticaulis koreensis RepID=UPI0003B582A4
yajC; preprotein translocase YajC subunit; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gemmatimonadetes_66_8_curated
preprotein translocase, YajC subunit
13_1_20cm_full_scaffold_3343_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4334..5458)
DNA (1125bp) protein (375aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Queuine tRNA-ribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A609_GEMAT
Queuine tRNA-ribosyltransferase
13_1_20cm_full_scaffold_3343_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5458..6429)
DNA (972bp) protein (324aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFZ1_THET1
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
13_1_20cm_full_scaffold_3343_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6429..7460)
DNA (1032bp) protein (344aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVB_GEMAT rbh
ruvB; Holliday junction DNA helicase RuvB
13_1_20cm_full_scaffold_3343_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7442..7657)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_3343_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7654..8211)
DNA (558bp) protein (186aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=mine drainage metagenome RepID=E6PYF5_9ZZZZ
Holliday junction ATP-dependent DNA helicase ruvA
13_1_20cm_full_scaffold_3343_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8208..8684)
DNA (477bp) protein (159aa)
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
13_1_20cm_full_scaffold_3343_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8681..9292)
DNA (612bp) protein (204aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Probable transcriptional regulatory protein NPH_1078 alias=gwe2_scaffold_54_58 id=2080780 tax=TA06 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria
UPF0082 protein yeeN
Displaying 14 items

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