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13_1_20cm_full_scaffold_3419

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3419_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2..265
DNA (264bp) protein (88aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E2M0_GEOSM
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
13_1_20cm_full_scaffold_3419_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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262..1338
DNA (1077bp) protein (359aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_3419_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1536..2426
DNA (891bp) protein (297aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_1_20cm_full_scaffold_3419_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2540..3253
DNA (714bp) protein (238aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWC2_Gemmatimonadetes_71_10_curated
Carboxymethylenebutenolidase n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SX32_PLAL2
carboxymethylenebutenolidase
13_1_20cm_full_scaffold_3419_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3302..4585)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348DB99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46686.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_20cm_full_scaffold_3419_6
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4614..5873
DNA (1260bp) protein (420aa)
Serine/threonine protein phosphatase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIN9_CORCM
yaeI; serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AFE10678.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;
13_1_20cm_full_scaffold_3419_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6016..6594)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Leptospira sp. B5-022 RepID=M6DEX0_9LEPT
TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcriptional regulator for cypB
13_1_20cm_full_scaffold_3419_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6689..7822
DNA (1134bp) protein (378aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_full_scaffold_3419_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7940..8485
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TU68_MARTH
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_full_scaffold_3419_10

Not on your lists

comp(8479..9498)
DNA (1020bp) protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA10983.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_3419_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(9608..10669)
DNA (1062bp) protein (354aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_1_20cm_full_scaffold_3419_12
unknown

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10688..11203
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_full_scaffold_3419_13
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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11187..11921
DNA (735bp) protein (245aa)
Glycosyl transferase family 2 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X4F5_DESRD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV69429.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Des
13_1_20cm_full_scaffold_3419_14
unknown

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11918..12256
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_full_scaffold_3419_15
unknown

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12234..13109
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_20cm_full_scaffold_3419_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13128..13607
DNA (480bp) protein (160aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
Displaying 16 items

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