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13_1_20cm_full_scaffold_3516

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3516_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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1..1056
DNA (1056bp) protein (352aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
amino acid permease Tax=RBG_16_Actinobacteria_67_10_curated
amino acid transporter
13_1_20cm_full_scaffold_3516_2
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1023..2117)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=3 Tax=Mycobacterium tuberculosis RepID=F7WVG2_MYCTD
Pe-pgrs family protein
Uncharacterised protein {ECO:0000313|EMBL:CRG09316.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="M
13_1_20cm_full_scaffold_3516_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2182..2877
DNA (696bp) protein (232aa)
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
para-aminobenzoate synthetase component I (EC:2.6.1.85)
Para-aminobenzoate synthase, component I n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3L7_9SPHN
13_1_20cm_full_scaffold_3516_trna_1
unknown

Not on your lists

2919..2992
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_3516_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3023..3583)
DNA (561bp) protein (187aa)
Putative NAD(P)H-dependent FMN reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T1_9GAMM
Putative NAD(P)H-dependent FMN reductase {ECO:0000313|EMBL:EIL94122.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
putative flavoprotein
13_1_20cm_full_scaffold_3516_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3600..3908)
DNA (309bp) protein (103aa)
branched-chain amino acid transport n=1 Tax=Streptomyces somaliensis RepID=UPI00029AD3C2
Branched-chain amino acid transport {ECO:0000313|EMBL:EON24003.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
branched-chain amino acid transport
13_1_20cm_full_scaffold_3516_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3905..4579)
DNA (675bp) protein (225aa)
AzlC family protein n=1 Tax=Streptomyces somaliensis RepID=UPI00029ADBCA
AzlC family protein Tax=RBG_16_Actinobacteria_68_12_curated
AzlC family protein
13_1_20cm_full_scaffold_3516_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4636..5088
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036FF1B3
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWC61218.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospor
MarR family transcriptional regulator
13_1_20cm_full_scaffold_3516_8
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

5346..5726
DNA (381bp) protein (127aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=GWC2_Chloroflexi_49_37_curated
Methylmalonyl-CoA epimerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIJ8_KORVE
Glyoxalase-like domain protein
13_1_20cm_full_scaffold_3516_9
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5777..6970)
DNA (1194bp) protein (398aa)
Class-V aminotransferase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BTY4_STRBB
class V aminotransferase
Class-V aminotransferase {ECO:0000313|EMBL:ADI09553.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strai
13_1_20cm_full_scaffold_3516_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7002..8063)
DNA (1062bp) protein (354aa)
Putative M24 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA28_GEMAT
putative M24 family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M24
13_1_20cm_full_scaffold_3516_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..9220)
DNA (1035bp) protein (345aa)
Putative monooxygenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYA0_9BRAD
Putative monooxygenase {ECO:0000313|EMBL:CCE11430.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hydrolase
13_1_20cm_full_scaffold_3516_12
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9285..10010
DNA (726bp) protein (242aa)
ArsR family transcriptional regulator n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M492_9BACL
ArsR family transcriptional regulator {ECO:0000313|EMBL:EST53441.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihu
putative ArsR family transcriptional regulator
13_1_20cm_full_scaffold_3516_13
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10038..10616)
DNA (579bp) protein (193aa)
UPI0003CF6ADA related cluster n=1 Tax=unknown RepID=UPI0003CF6ADA
Uncharacterized protein {ECO:0000313|EMBL:ESW88590.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_1_20cm_full_scaffold_3516_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10683..11588
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W796_9GAMM
DNA-binding domain-containing protein, AraC-type Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
DNA-binding domain-containing protein, AraC-type
13_1_20cm_full_scaffold_3516_15
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11686..12102)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035E486F
Integral membrane protein {ECO:0000313|EMBL:EEP72498.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.
hypothetical protein
Displaying 16 items

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