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13_1_20cm_full_scaffold_3580

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3580_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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1..1398
DNA (1398bp) protein (466aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U917_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_full_scaffold_3580_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1723..2490
DNA (768bp) protein (256aa)
Glycosyl transferase, group 1 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMH4_METH6
glycosyl transferase, group 1 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glycosyl transferase
13_1_20cm_full_scaffold_3580_3

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comp(2501..3547)
DNA (1047bp) protein (349aa)
SAM-dependent methyltransferase, putative n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39TL8_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:KKM94506.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SAM-dependent methyltransferase
13_1_20cm_full_scaffold_3580_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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3702..4721
DNA (1020bp) protein (340aa)
Putative glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6Q2_METCZ
putative glycosyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
glycosyltransferase
13_1_20cm_full_scaffold_3580_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4839..5906
DNA (1068bp) protein (356aa)
Glycosyl transferase, group 1 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B824_METTP
putative glycosyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
glycosyl transferase, group 1
13_1_20cm_full_scaffold_3580_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5947..6927
DNA (981bp) protein (327aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=867904 species="Archae
GDP-mannose 4,6-dehydratase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZN4_METHD
GDP-mannose 4,6-dehydratase
13_1_20cm_full_scaffold_3580_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6931..7428)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037B18B2
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_full_scaffold_3580_8
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7467..8252)
DNA (786bp) protein (262aa)
Transcriptional regulator, TrmB n=1 Tax=Ferroplasma sp. Type II RepID=T0MA55_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EQB74074.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" s
putative transcriptional regulator
13_1_20cm_full_scaffold_3580_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8314..9042
DNA (729bp) protein (243aa)
Methyltransferase type 11 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S8I6_9BACT
methyltransferase type 11 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_full_scaffold_3580_10
unknown

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comp(9164..9406)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_full_scaffold_3580_11
Thermoproteus sp. AZ2, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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9652..9996
DNA (345bp) protein (115aa)
Ribonuclease HI n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1M4_9CREN
Uncharacterized protein {ECO:0000313|EMBL:KJR74200.1}; TaxID=1609232 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus sp. AZ2.;"
ribonuclease H
13_1_20cm_full_scaffold_3580_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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10102..11658
DNA (1557bp) protein (519aa)
parallel beta-helix repeat (two copies) Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_full_scaffold_3580_trna_1
unknown

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comp(11700..11772)
DNA (73bp)
transferRNA
Displaying 13 items

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