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13_1_20cm_full_scaffold_3635

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3635_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..814
DNA (813bp) protein (271aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUV6_9RHIZ
amidohydrolase 2
13_1_20cm_full_scaffold_3635_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

842..1765
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003179275
Uncharacterized protein {ECO:0000313|EMBL:ETX00582.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
NHL repeat family protein
13_1_20cm_full_scaffold_3635_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..3037)
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Signal transduction histidine kinase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9V4_MAGSA
Signal transduction histidine kinase
13_1_20cm_full_scaffold_3635_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

3357..4331
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000371A665
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_3635_5
unknown

Not on your lists

comp(4568..4942)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_full_scaffold_3635_6
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5059..6627)
DNA (1569bp) protein (523aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJH1_9BRAD
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIG59927.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
ABC transporter peptide-binding protein
13_1_20cm_full_scaffold_3635_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6839..7249
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGZ5_NITSI
putative dioxygenase
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24081.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
13_1_20cm_full_scaffold_3635_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7338..7931)
DNA (594bp) protein (198aa)
glyoxalase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B6AEED
Uncharacterized protein {ECO:0000313|EMBL:ETW96301.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_full_scaffold_3635_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8160..8942)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEL1_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72489.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_20cm_full_scaffold_3635_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8946..9686)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C5E47 rbh
Hemolysin {ECO:0000313|EMBL:KGM33601.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
tlyA; hemolysin A
13_1_20cm_full_scaffold_3635_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..11784)
DNA (1941bp) protein (647aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR71_PARL1 rbh
1-deoxy-D-xylulose-5-phosphate synthase
13_1_20cm_full_scaffold_3635_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..12710)
DNA (912bp) protein (304aa)
ispA; geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:ACI98000.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ACI98000.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
Geranylgeranyl pyrophosphate synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRB4_RHOCS rbh
13_1_20cm_full_scaffold_3635_13
unknown

Not on your lists

comp(12733..12930)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_full_scaffold_3635_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13028..13954)
DNA (927bp) protein (309aa)
Histone deacetylase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2X6_9PROT rbh
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EDP61486.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative deacetylase; histone deacetylase superfamily
13_1_20cm_full_scaffold_3635_15
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14046..14414)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAI3_ANAD2
Uncharacterized protein {ECO:0000313|EMBL:GAO04526.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
hypothetical protein
13_1_20cm_full_scaffold_3635_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14411..15619)
DNA (1209bp) protein (403aa)
Group 1 glycosyl transferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K271_9PROT rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EKE76964.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceaniba
glycosyl transferase family 1
13_1_20cm_full_scaffold_3635_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15717..17672)
DNA (1956bp) protein (652aa)
exosortase system-associated amidotransferase 1 (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYU5_9PLAN
asparagine synthase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_20cm_full_scaffold_3635_18
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17855..18211
DNA (357bp) protein (119aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLD1_9BACT
glycosyl transferase family protein; K07011 Tax=RBG_16_Betaproteobacteria_56_24_curated
Displaying 18 items

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