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13_1_20cm_full_scaffold_3752

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_3752_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..2698
DNA (2697bp) protein (899aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_2 repeat-containing protein
TPR Domain containing protein alias=gwe2_scaffold_136_118 id=1798744 tax=TA06 species=Tetrahymena thermophila SB210 genus=Tetrahymena taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown rbh
13_1_20cm_full_scaffold_3752_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2698..3849
DNA (1152bp) protein (384aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein alias=gwe2_scaffold_136_119 id=1798746 tax=TA06 species=Anaerolinea thermophila UNI-1 genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
hypothetical protein
13_1_20cm_full_scaffold_3752_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3842..4669
DNA (828bp) protein (276aa)
TPR repeat-containing protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRE8_OPITP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_3752_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4666..5025
DNA (360bp) protein (120aa)
Predicted regulator of Ras-like GTPase activity, member of the Roadblock/LC7/MglB family n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYS6_METKA
Ras-like GTPase activity regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_full_scaffold_3752_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5062..5448
DNA (387bp) protein (129aa)
Roadblock/LC7 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_3752_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5453..6052
DNA (600bp) protein (200aa)
gliding motility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ARF/SAR superfamily protein
Mutual gliding-motility protein MglA alias=gwe2_scaffold_136_123 id=1798755 tax=TA06 species=Myxococcales genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_full_scaffold_3752_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6049..8028
DNA (1980bp) protein (660aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A893_GEMAT rbh
DnaA family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DnaA family protein
13_1_20cm_full_scaffold_3752_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8028..9644
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A894_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_3752_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9641..10459
DNA (819bp) protein (273aa)
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal {ECO:0000313|EMBL:AHG90599.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MCP methyltransferase, CheR-type alias=gwe2_scaffold_136_126 id=1798764 tax=TA06 species=Methanosalsum zhilinae DSM 4017 genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
13_1_20cm_full_scaffold_3752_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10456..10962
DNA (507bp) protein (169aa)
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
chemotaxis protein CheD n=1 Tax=Selenomonas bovis RepID=UPI0003748039
CheD; chemoreceptor glutamine deamidase CheD
13_1_20cm_full_scaffold_3752_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10946..12061
DNA (1116bp) protein (372aa)
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemm
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A896_GEMAT rbh
13_1_20cm_full_scaffold_3752_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12168..12587
DNA (420bp) protein (140aa)
CheW protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJX4_ANADE
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
chemotaxis protein CheW
13_1_20cm_full_scaffold_3752_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12584..13060
DNA (477bp) protein (159aa)
CheW protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PPK9_9CLOT
cheW2; chemotaxis protein Chew Tax=GWC2_Gemmatimonadetes_71_10_curated
CheW protein
13_1_20cm_full_scaffold_3752_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13060..13923
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A898_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_full_scaffold_3752_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13965..14786
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A899_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_full_scaffold_3752_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14821..15006
DNA (186bp) protein (62aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_full_scaffold_3752_trna_1
unknown

Not on your lists

15022..15095
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_3752_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15131..16924
DNA (1794bp) protein (598aa)
Tetratricopeptide repeat-containing protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DEB0_9BURK
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_full_scaffold_3752_trna_2
unknown

Not on your lists

16975..17048
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_3752_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17129..18004
DNA (876bp) protein (292aa)
mraW; putative S-adenosyl-methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSMH_GEMAT
13_1_20cm_full_scaffold_3752_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17997..18281
DNA (285bp) protein (95aa)
Cell division protein FtsL family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_full_scaffold_3752_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18297..20267
DNA (1971bp) protein (657aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A4_GEMAT
penicillin-binding protein transpeptidase
13_1_20cm_full_scaffold_3752_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20264..21718
DNA (1455bp) protein (485aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWC2_Gemmatimonad
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A5_GEMAT
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
13_1_20cm_full_scaffold_3752_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21840..23138
DNA (1299bp) protein (433aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A6_GEMAT
13_1_20cm_full_scaffold_3752_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23160..23624
DNA (465bp) protein (155aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MRAY_GEMAT
Displaying 25 items

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