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13_1_20cm_full_scaffold_4048

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4048_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..489)
DNA (489bp) protein (163aa)
mvd; diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003814E9E
diphosphomevalonate decarboxylase
13_1_20cm_full_scaffold_4048_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(486..1229)
DNA (744bp) protein (248aa)
Putative haloacid dehalogenase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2V8_METPS
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative haloacid dehalogenase
13_1_20cm_full_scaffold_4048_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1238..1642)
DNA (405bp) protein (135aa)
Protein archease n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W861_UNCMA
archease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_full_scaffold_4048_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1720..2472)
DNA (753bp) protein (251aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P4Z3_AROAE
putative radical activating enzyme; K10026 queuosine biosynthesis protein QueE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
radical activating enzyme
13_1_20cm_full_scaffold_4048_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2499..3218)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-G15 RepID=UPI00037F892C
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
queuosine biosynthesis protein QueC
13_1_20cm_full_scaffold_4048_6
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3254..3679)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4N8G1_9CAUL
13_1_20cm_full_scaffold_4048_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3765..5402)
DNA (1638bp) protein (546aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_full_scaffold_4048_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5500..5739
DNA (240bp) protein (80aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_4048_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(5764..6735)
DNA (972bp) protein (324aa)
Diphthamide synthase subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVT3_METMA
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Diphthamide synthase subunit
13_1_20cm_full_scaffold_4048_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(6784..7293)
DNA (510bp) protein (170aa)
50S ribosomal protein L10e n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z4H9_9EURY
rpl10e; 50S ribosomal protein L10AE; K02866 large subunit ribosomal protein L10e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl10e; 50S ribosomal protein L10e
13_1_20cm_full_scaffold_4048_11
unknown

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comp(7327..7620)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_full_scaffold_4048_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7671..8450
DNA (780bp) protein (260aa)
isopentenyl phosphate kinase (EC:2.7.4.26)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365E8E8
putative archaeal kinase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_full_scaffold_4048_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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8452..9522
DNA (1071bp) protein (357aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=RBG_16_Euryarchaeota_67_27_curated
fni; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=2 Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
13_1_20cm_full_scaffold_4048_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9526..10647
DNA (1122bp) protein (374aa)
Bifunctional short chain isoprenyl diphosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Euryarchaeota_67_27_curated
Farnesylgeranyl diphosphate synthase n=1 Tax=Aeropyrum camini SY1 = JCM 12091 RepID=U3TDR0_9CREN
fgs; farnesylgeranyl diphosphate synthase
13_1_20cm_full_scaffold_4048_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10644..11348)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB Tax=RBG_16_Euryarchaeota_67_27_curated
radB; DNA repair and recombination protein RadB
Displaying 15 items

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