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13_1_20cm_full_scaffold_4089

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_4089_1

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comp(3..599)
DNA (597bp) protein (199aa)
Phosphodiesterase family protein n=2 Tax=Paenibacillus RepID=F5LFZ5_9BACL
Marine sediment metagenome DNA, contig: S01H1_S09775 {ECO:0000313|EMBL:GAG09196.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
yfcE: phosphodiesterase, MJ0936 family
13_1_20cm_full_scaffold_4089_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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685..1425
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK04_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85016.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_full_scaffold_4089_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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1425..1805
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK03_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85015.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_full_scaffold_4089_4
unknown

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1817..1990
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_full_scaffold_4089_5
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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1993..3255
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY38_9GAMM
MFS family major facilitator transporter {ECO:0000313|EMBL:EKF04487.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
putative drug resistance protein
13_1_20cm_full_scaffold_4089_6
Chlamydomonas incerta, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

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comp(3261..4757)
DNA (1497bp) protein (499aa)
Plus agglutinin (Fragment) n=1 Tax=Chlamydomonas incerta RepID=Q58NA5_CHLIN
Plus agglutinin {ECO:0000313|EMBL:AAX33674.1}; Flags: Fragment;; TaxID=51695 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" sour
hypothetical protein
13_1_20cm_full_scaffold_4089_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(4861..5853)
DNA (993bp) protein (331aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:ACZ40876.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ACZ40876.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobac
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAN3_SPHTD
13_1_20cm_full_scaffold_4089_8
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5853..7289)
DNA (1437bp) protein (479aa)
Putative Isopropylmalate/citramalate/homocitrate synthase n=1 Tax=mine drainage metagenome RepID=E6Q4U0_9ZZZZ
2-isopropylmalate synthase {ECO:0000313|EMBL:KJR44661.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.
aksA; trans-homoaconitate synthase
13_1_20cm_full_scaffold_4089_9
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(7276..7863)
DNA (588bp) protein (196aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit 1; EC=4.2.1.33;; Alpha-IPM isomerase 1; Short=IPMI 1;; Isopropylmalate isomerase 1; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcale
3-isopropylmalate dehydratase small subunit 1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=LEUD1_PYRAB
13_1_20cm_full_scaffold_4089_10
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7925..9214)
DNA (1290bp) protein (430aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYK4_9FIRM
3-isopropylmalate dehydratase large subunit Tax=S_Thermoanaerobacterales_50_218
13_1_20cm_full_scaffold_4089_11
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9222..9377)
DNA (156bp) protein (52aa)
D-malate dehydrogenase [decarboxylating] {ECO:0000313|EMBL:KJL29085.1}; EC=1.1.1.83 {ECO:0000313|EMBL:KJL29085.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
13_1_20cm_full_scaffold_4089_12
Streptomyces griseovariabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9407..9838)
DNA (432bp) protein (144aa)
Putative dehydrogenase n=1 Tax=Streptomyces griseovariabilis subsp. bandungensis RepID=G9JKL9_9ACTO
Putative dehydrogenase {ECO:0000313|EMBL:AET98911.1}; TaxID=284637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseovariabilis subsp.
3-isopropylmalate dehydrogenase
13_1_20cm_full_scaffold_4089_13
unknown

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9852..10163
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_full_scaffold_4089_14
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10150..11667)
DNA (1518bp) protein (506aa)
benzoate-CoA ligase (EC:6.2.1.25)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00037ED189
4-hydroxybenzoate--CoA ligase {ECO:0000313|EMBL:KGQ21102.1}; TaxID=276 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
13_1_20cm_full_scaffold_4089_15

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11922..12203
DNA (282bp) protein (94aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:EQD74621.1}; EC=1.4.-.- {ECO:0000313|EMBL:EQD74621.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecolo
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=mine drainage metagenome RepID=T1BP86_9ZZZZ
Displaying 15 items

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